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NIb_protein
Euk-VirScallion_mosaic_virus
NIb_protein__NP_734131__Scallion_mosaic_virus__157018
Identity
- Accession:
- NP_734131 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
92.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Scallion_mosaic_virus
TaxID: 157018
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 30-82_403-476
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 36.1 | 4.50e-09 | 49.6% | 12.4% |
D2
medium
residues 83-105_224-250_312-402
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 47.2 | 2.00e-12 | 64.5% | 21.1% |
D3
medium
residues 106-223_251-311
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 77.3 | 1.40e-21 | 66.5% | 27.3% |
| PF00680.26 | RdRP_1 | 42.5 | 5.40e-11 | 34.6% | 13.3% |