NIb_protein

Euk-Vir

Lettuce_mosaic_virus

NIb_protein__NP_734161__Lettuce_mosaic_virus__12202

Identity

91.3 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Lettuce_mosaic_virus

TaxID: 12202

View cluster (450 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-63_396-476

PDB

Domain cluster: rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	30.3	2.70e-07	66.7%	13.1%

D2 medium residues 64-79_167-221_256-314

PDB

Domain cluster: rep: NIb__YP_009252418__Tobacco_mosqueado_virus__1792583__D13-29_64-80_248-311

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	53.0	3.50e-14	54.6%	12.4%
PF00680.26	RdRP_1	34.2	1.70e-08	46.9%	13.1%

D3 medium residues 80-110_222-255_315-395

PDB

Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	47.2	2.00e-12	56.2%	20.0%
PF00680.26	RdRP_1	26.7	3.30e-06	33.6%	8.9%

D4 medium residues 111-166

PDB

Domain cluster: rep: NIb__YP_004564597__Hardenbergia_mosaic_virus__409486__D110-163