←Back to structures
NIb_protein
Euk-VirYambean_mosaic_virus
NIb_protein__YP_004940327__Yambean_mosaic_virus__418827
Identity
- Accession:
- YP_004940327 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
90.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Yambean_mosaic_virus
TaxID: 418827
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-90_403-419
Domain cluster:
representative
D2
medium
residues 91-216_260-300
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 78.6 | 5.80e-22 | 82.0% | 30.9% |
D3
medium
residues 217-259_301-402
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 71.6 | 7.70e-20 | 71.7% | 24.0% |
| PF00680.26 | RdRP_1 | 33.2 | 3.60e-08 | 31.0% | 10.0% |
D4
medium
residues 420-502
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481