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NIb_protein
Euk-VirCelery_mosaic_virus
NIb_protein__YP_006423981__Celery_mosaic_virus__112436
Identity
- Accession:
- YP_006423981 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
92.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Celery_mosaic_virus
TaxID: 112436
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 405-476
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 29.5 | 4.60e-07 | 76.4% | 11.8% |
D2
medium
residues 1-33_64-85_109-218_279-311
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 78.3 | 7.00e-22 | 79.3% | 30.2% |
D3
medium
residues 86-108_219-278_312-395
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 50.0 | 2.80e-13 | 52.1% | 20.7% |
| PF00680.26 | RdRP_1 | 44.5 | 1.30e-11 | 47.3% | 15.8% |