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NIb_protein
Euk-VirSweet_potato_virus_2
NIb_protein__YP_006438196__Sweet_potato_virus_2__453050
Identity
- Accession:
- YP_006438196 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
91.3
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Sweet_potato_virus_2
TaxID: 453050
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 37-78_400-476
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D2
medium
residues 108-214_253-313
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 72.0 | 5.90e-20 | 63.7% | 24.9% |
| PF00680.26 | RdRP_1 | 41.9 | 7.80e-11 | 38.7% | 13.8% |
D3
medium
residues 215-252_314-399
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 48.6 | 7.50e-13 | 71.8% | 21.1% |