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NIb_protein
Euk-VirChinese_yam_necrotic_mosaic_virus
NIb_protein__YP_006590101__Chinese_yam_necrotic_mosaic_virus__128818
Identity
- Accession:
- YP_006590101 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
89.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Macluravirus›
Chinese_yam_necrotic_mosaic_virus
TaxID: 128818
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-91_446-537
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
D2
medium
residues 20-50_202-237_287-302_329-353
Domain cluster:
rep: NIb__YP_009252418__Tobacco_mosqueado_virus__1792583__D13-29_64-80_248-311
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 28.1 | 1.20e-06 | 51.8% | 10.0% |
D3
medium
residues 267-286_354-433
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 54.9 | 9.00e-15 | 84.0% | 17.1% |