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NIb_protein
Euk-VirPecan_mosaic-associated_virus
NIb_protein__YP_009256204_NIb_protein__Pecan_mosaic-associated_virus__1856031
Identity
- Accession:
- YP_009256204_NIb_protein ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
89.2
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Pecan_mosaic-associated_virus
TaxID: 1856031
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 89-111_252-314
Domain cluster:
rep: NIb__YP_010088127__Dendrobium_chlorotic_mosaic_virus__2562807__D81-113_256-322
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 49.0 | 5.60e-13 | 75.6% | 13.8% |
D2
medium
residues 112-219
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 76.1 | 3.40e-21 | 100.0% | 25.3% |
D3
medium
residues 220-251_315-408
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 47.1 | 2.20e-12 | 77.0% | 21.3% |
D4
medium
residues 409-502
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481