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NIb_protein
Euk-VirWild_onion_symptomless_virus
NIb_protein__YP_009259520__Wild_onion_symptomless_virus__1862127
Identity
- Accession:
- YP_009259520 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
91.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Wild_onion_symptomless_virus
TaxID: 1862127
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-28_65-84_108-193_291-309
Domain cluster:
rep: NIb__YP_003725727__Panax_virus_Y__796352__D1-80_166-195
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 55.1 | 8.00e-15 | 87.6% | 24.2% |
D2
medium
residues 29-64_397-476
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 34.4 | 1.50e-08 | 59.5% | 12.9% |
D3
medium
residues 85-107_225-250_310-396
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 68.8 | 5.50e-19 | 75.7% | 24.4% |
D4
medium
residues 194-224_251-290
Domain cluster:
rep: NIb__YP_009272678__Callistephus_mottle_virus__1886606__D191-219_253-278