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NIb_protein

Euk-Vir

Tomato_mild_mottle_virus

NIb_protein__YP_009509087__Tomato_mild_mottle_virus__178599

Identity

Accession:
YP_009509087 ↗
Protein ID:
NIb_protein
Kingdom:
euk

Quality

88.9 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Ipomovirus› Tomato_mild_mottle_virus

TaxID: 178599

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-39_394-495
PDB
Domain cluster: rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D2 medium residues 72-101_217-252_310-393
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 36.0 4.90e-09 56.7% 21.3%
D3 medium residues 102-119_253-309
PDB
Domain cluster: rep: NIb__YP_010088127__Dendrobium_chlorotic_mosaic_virus__2562807__D81-113_256-322
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 29.2 5.80e-07 89.3% 12.7%
D4 medium residues 120-216
PDB
Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 46.6 3.00e-12 100.0% 23.1%