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NIb_protein
Euk-VirKonjac_mosaic_virus
NIb_protein__YP_529498__Konjac_mosaic_virus__322053
Identity
- Accession:
- YP_529498 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
91.4
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Konjac_mosaic_virus
TaxID: 322053
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-26_62-105_163-191_276-317
Domain cluster:
rep: NIb__YP_009252418__Tobacco_mosqueado_virus__1792583__D13-29_64-80_248-311
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 34.9 | 1.10e-08 | 55.9% | 10.4% |
| PF00680.26 | RdRP_1 | 36.7 | 2.90e-09 | 33.1% | 8.4% |
D2
medium
residues 27-61_409-474
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D3
medium
residues 106-162_192-211_252-275
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
D4
medium
residues 212-251_318-408
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 43.8 | 2.10e-11 | 69.5% | 20.7% |
| PF00680.26 | RdRP_1 | 26.5 | 3.90e-06 | 33.6% | 9.6% |