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NIb_protein
Euk-VirDaphne_mosaic_virus
NIb_protein__YP_611119__Daphne_mosaic_virus__578107
Identity
- Accession:
- YP_611119 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
89.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Daphne_mosaic_virus
TaxID: 578107
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 16-86_112-205_275-316
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 43.2 | 3.10e-11 | 50.2% | 22.7% |
| PF00680.26 | RdRP_1 | 27.0 | 2.70e-06 | 22.2% | 8.7% |
D2
medium
residues 87-111_206-227_247-274
Domain cluster:
rep: NIb_protein__YP_006423993__Chilli_ringspot_virus__414528__D83-109_251-288
D3
medium
residues 228-246_317-412
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 57.5 | 1.50e-15 | 93.9% | 23.8% |
D4
medium
residues 413-507
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481