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NIb_protein
Euk-VirWisteria_vein_mosaic_virus
NIb_protein__YP_842358__Wisteria_vein_mosaic_virus__201862
Identity
- Accession:
- YP_842358 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
91.1
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Wisteria_vein_mosaic_virus
TaxID: 201862
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-41_403-501
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D2
medium
residues 1-23_66-88_167-193_251-314
Domain cluster:
rep: NIb__YP_009252418__Tobacco_mosqueado_virus__1792583__D13-29_64-80_248-311
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 48.9 | 6.10e-13 | 47.4% | 14.0% |
| PF00680.26 | RdRP_1 | 25.6 | 6.80e-06 | 31.4% | 6.4% |
D3
medium
residues 89-105_224-250_315-398
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 47.8 | 1.30e-12 | 68.8% | 20.7% |
D4
medium
residues 106-166_194-223
Domain cluster:
rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224