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NIb_replicase
Euk-VirSugarcane_mosaic_virus
NIb_replicase__NP_734141__Sugarcane_mosaic_virus__12224
Identity
- Accession:
- NP_734141 ↗
- Protein ID:
- NIb_replicase
- Kingdom:
- euk
Quality
91.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Sugarcane_mosaic_virus
TaxID: 12224
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-79_114-214_275-313
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 64.9 | 8.20e-18 | 53.7% | 25.3% |
D2
medium
residues 80-113_215-274_314-409
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 49.6 | 3.60e-13 | 50.0% | 20.9% |
| PF00680.26 | RdRP_1 | 45.1 | 8.80e-12 | 37.9% | 14.0% |
D3
medium
residues 410-506
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481