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NODE_12_length_310542_cov_175.846709.1__X__X__00017
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00017
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-302
Domain cluster:
rep: OM982670.1__UPI12449.1__X__00215__D151-400
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pwfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 19.0 | 2.76e-01 | 76.8% | 48.1% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.67 | 30.0 | 4.56e-01 | 83.7% | 100.0% |
| 2uuiA00 | 1.20.120.550 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Membrane associated eicosanoid/glutathione metabolism-like domain | 0.64 | 30.0 | 3.83e-01 | 99.6% | 72.9% |
| 3s84A02 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.59 | 33.0 | 4.20e-01 | 99.6% | 89.8% |
| 1zvzA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.59 | 24.0 | 3.46e-01 | 96.2% | 77.4% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.59 | 29.0 | 3.87e-01 | 70.3% | 86.8% |
| 6dlzA01 | 1.20.140.150 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › | 0.57 | 31.0 | 3.69e-01 | 97.3% | 74.6% |
| 2l10A00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.56 | 34.0 | 4.24e-01 | 98.9% | 97.5% |
| 4yjwA00 | 1.20.120.930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 | 0.54 | 31.0 | 3.94e-01 | 86.3% | 95.4% |
| 3l39A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.53 | 32.0 | 3.58e-01 | 96.2% | 75.5% |
| 5c4yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 21.0 | 2.91e-01 | 94.3% | 69.1% |
| 4iggB02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.51 | 25.0 | 3.61e-01 | 85.9% | 100.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928991 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.71 | 64.0 | 6.52e-01 | 96.6% | 97.3% |
| 3588491 | 3882.1.1.0 ↗ | alpha bundles › Atg17 › Atg17 › Atg17 | 0.70 | 66.0 | 6.30e-01 | 100.0% | 98.7% |
| 4408516 | 3755.4.1.44 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › TrbL | 0.67 | 54.0 | 5.84e-01 | 95.1% | 98.2% |
| 3601971 | 5041.1.1.0 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C | 0.65 | 40.0 | 4.89e-01 | 77.6% | 95.2% |
| 3221532 | 601.1.2.76 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › ATP-synt_C | 0.62 | 41.0 | 4.86e-01 | 87.1% | 96.1% |
| 3066555 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.60 | 52.0 | 5.07e-01 | 100.0% | 83.7% |
| 3340407 | 611.7.1.14 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › DUF7792 | 0.58 | 33.0 | 4.05e-01 | 93.9% | 88.1% |
| 4223295 | 1174.1.1.1 ↗ | alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › TMEM175 | 0.56 | 36.0 | 4.10e-01 | 96.6% | 83.5% |
| 3228861 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.54 | 33.0 | 3.16e-01 | 84.0% | 49.7% |
| 3270091 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.53 | 38.0 | 4.21e-01 | 71.9% | 97.1% |
| 3289100 | 1174.1.1.1 ↗ | alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › TMEM175 | 0.50 | 34.0 | 3.81e-01 | 99.6% | 86.8% |
| 3612806 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.50 | 30.0 | 3.75e-01 | 85.2% | 98.7% |