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NODE_12_length_310542_cov_175.846709.1__X__X__00064

Bact-Vir

NODE_12_length_310542_cov_175.846709.1__X__X__00064

Identity

Kingdom:
phage

Quality

51.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 821-909
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jguA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 48.0 4.71e-01 85.4% 80.0%
2cr5A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 47.0 4.90e-01 100.0% 95.0%
6jl3A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.59 45.0 4.86e-01 100.0% 98.6%
8d40A02 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.59 42.0 4.07e-01 75.3% 81.8%
1wgdA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 48.0 4.76e-01 100.0% 87.1%
6djwA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 44.0 4.71e-01 98.9% 100.0%
5k6uA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 43.0 4.29e-01 79.8% 82.2%
2dafA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 44.0 4.72e-01 98.9% 100.0%
1ef1A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.57 46.0 4.90e-01 98.9% 100.0%
4m00A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 42.0 4.31e-01 79.8% 83.7%
2cr6A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 43.0 4.33e-01 83.1% 85.7%
1wggA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 42.0 4.55e-01 100.0% 100.0%
1x4xA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.11e-01 85.4% 78.3%
2f2hA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 31.0 3.78e-01 93.3% 100.0%
4b6wA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.55 45.0 4.62e-01 100.0% 96.5%
5f7uA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 36.0 3.79e-01 96.6% 80.3%
3wz2B00 3.40.50.10900 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit 0.51 40.0 3.10e-01 88.8% 88.2%
3gf8A01 2.60.40.2100 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 44.0 3.72e-01 100.0% 85.4%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4291271 221.1.1.38 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new 0.84 63.0 6.79e-01 100.0% 92.0%
4554776 221.1.1.38 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Flg_new 0.83 72.0 7.35e-01 100.0% 95.3%
4186514 3114.1.1.1 beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › MucBP 0.70 47.0 5.14e-01 98.9% 87.1%
5035001 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.63 48.0 4.62e-01 84.3% 72.0%
4024759 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.61 46.0 4.99e-01 98.9% 96.0%
3497806 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.55 42.0 3.94e-01 84.3% 75.7%
3174815 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 45.0 4.35e-01 95.5% 96.2%
5045340 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 47.0 4.69e-01 100.0% 96.7%
3705047 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 47.0 4.64e-01 100.0% 97.9%
5079246 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 46.0 4.52e-01 100.0% 98.9%
3604663 304.51.1.1 a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas_Cas6_C 0.53 38.0 3.46e-01 77.5% 83.8%
3610353 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.53 42.0 4.08e-01 97.8% 77.1%
D2 high residues 912-999
PDB
D3 high residues 1302-1385
PDB
D4 medium residues 230-249_365-407_452-478
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00082.28 best Peptidase_S8 33.2 5.10e-08 83.3% 19.9%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qfhC02 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.83 70.0 4.55e-01 88.9% 92.2%
7v7yA01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.81 67.0 4.53e-01 86.7% 93.2%
2z2xA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.80 67.0 4.44e-01 87.8% 94.0%
4zoqM00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.80 67.0 4.40e-01 87.8% 90.7%
3afgA02 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.79 64.0 4.32e-01 84.4% 93.7%
1y9zB01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.78 64.0 4.38e-01 86.7% 91.8%
3lpaA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.78 66.0 4.38e-01 91.1% 92.9%
2w2oA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.75 63.0 4.33e-01 87.8% 97.1%
1sh7A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.75 64.0 4.43e-01 91.1% 92.5%
3zxxA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.74 56.0 3.94e-01 80.0% 95.8%
4aktB00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.73 62.0 4.15e-01 90.0% 94.4%
5zigA00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.50 43.0 2.82e-01 95.6% 93.3%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5006280 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.85 60.0 4.35e-01 72.2% 60.9%
5046589 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.85 61.0 4.11e-01 74.4% 65.1%
3958005 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.84 59.0 4.28e-01 73.3% 72.2%
4477069 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.82 68.0 4.62e-01 87.8% 90.5%
4371293 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.82 68.0 4.63e-01 87.8% 89.3%
3007162 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.81 70.0 4.58e-01 92.2% 92.7%
4105181 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.80 67.0 4.41e-01 87.8% 90.6%
1807466 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.80 67.0 4.40e-01 87.8% 90.7%
5040513 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.80 66.0 4.50e-01 87.8% 89.5%
5038789 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.79 66.0 4.48e-01 87.8% 91.5%
4971082 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.79 65.0 4.32e-01 86.7% 91.1%
4936729 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.79 64.0 4.40e-01 84.4% 91.5%
4386531 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.77 67.0 4.37e-01 92.2% 89.9%
3896569 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.77 65.0 4.36e-01 88.9% 90.5%
5078722 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.77 64.0 4.24e-01 87.8% 96.3%
4014875 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.76 65.0 4.45e-01 90.0% 92.0%
3176116 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.76 66.0 4.32e-01 91.1% 86.3%
4837365 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.76 64.0 4.40e-01 87.8% 94.5%
4541146 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.75 65.0 4.41e-01 92.2% 95.9%
4972044 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.74 55.0 3.69e-01 77.8% 94.2%
5055543 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.74 62.0 4.14e-01 87.8% 94.6%
152979 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.74 61.0 4.25e-01 87.8% 96.0%
4647647 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.74 69.0 4.75e-01 100.0% 92.9%
4380867 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.73 61.0 3.91e-01 87.8% 84.2%
3184490 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.73 65.0 4.24e-01 93.3% 85.6%
5057557 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.73 60.0 3.96e-01 87.8% 95.4%
5040395 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.72 61.0 3.95e-01 87.8% 87.8%
3783404 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.72 64.0 4.32e-01 94.4% 91.0%
4161004 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.72 63.0 4.12e-01 92.2% 91.3%
4012785 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.71 59.0 3.99e-01 87.8% 86.5%
3727609 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.71 58.0 3.95e-01 87.8% 88.9%
4022781 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.68 57.0 3.90e-01 91.1% 88.0%
5027545 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.64 53.0 3.68e-01 87.8% 93.5%
1834153 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.61 50.0 3.73e-01 86.7% 91.0%
D5 medium residues 250-364_408-451
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00082.28 best Peptidase_S8 37.3 2.70e-09 78.6% 50.2%
PF00082.28 Peptidase_S8 24.8 1.80e-05 29.6% 12.2%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7v7yA01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.95 92.0 7.20e-01 100.0% 81.0%
3qfhC02 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.93 91.0 6.66e-01 100.0% 81.6%
4lvnA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.93 90.0 6.77e-01 100.0% 80.7%
2z2xA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.92 90.0 6.85e-01 100.0% 81.8%
3vv3A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.92 90.0 6.75e-01 100.0% 78.4%
4zoqM00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.92 89.0 6.71e-01 100.0% 79.0%
2ixtA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.92 89.0 6.85e-01 100.0% 81.9%
3afgA02 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.91 89.0 6.89e-01 100.0% 82.7%
1sh7A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.91 89.0 7.05e-01 100.0% 78.3%
4yn3A01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.90 87.0 6.43e-01 100.0% 81.4%
3zxxA00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.84 81.0 6.61e-01 100.0% 95.5%
4aktB00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.84 80.0 6.14e-01 100.0% 90.7%
4kq9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 42.0 5.20e-01 86.2% 94.9%
3d02A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 55.0 5.69e-01 99.4% 87.1%
2h3hA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 56.0 5.79e-01 99.4% 88.5%
4rweA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 53.0 5.86e-01 100.0% 96.9%
4wzzA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 55.0 5.50e-01 100.0% 80.9%
5ibqA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 53.0 5.79e-01 100.0% 95.5%
4ru1A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 55.0 5.84e-01 100.0% 94.3%
3l6uA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 50.0 5.59e-01 99.4% 94.4%
2vk2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 53.0 5.76e-01 98.7% 96.9%
4rxmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 52.0 5.66e-01 99.4% 96.9%
3brsA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 54.0 5.79e-01 99.4% 96.4%
5ix8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 54.0 5.46e-01 100.0% 83.0%
1abeA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 53.0 5.71e-01 99.4% 94.9%
3l49A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 51.0 5.60e-01 98.1% 96.1%
2x7xA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.67 51.0 5.57e-01 98.7% 95.4%
3g1wA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 55.0 5.76e-01 99.4% 95.2%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 50.0 5.51e-01 100.0% 96.2%
4xxhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 52.0 5.50e-01 100.0% 93.5%
4rxuA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 51.0 5.31e-01 100.0% 88.4%
1jx6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.64 53.0 5.09e-01 99.4% 76.4%
2r0qC01 3.40.50.1390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Resolvase, N-terminal catalytic domain 0.62 40.0 4.23e-01 97.5% 73.9%
8a57D01 3.40.50.11060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTPase HflX, N-terminal domain 0.61 39.0 4.71e-01 88.1% 100.0%
3ndcA01 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.61 34.0 3.93e-01 84.3% 75.2%
3qvjA00 3.40.50.12500 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 55.0 4.70e-01 98.1% 90.2%
5o8zB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 45.0 4.81e-01 98.7% 90.1%
6cv6D00 3.40.50.9100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II 0.59 51.0 5.34e-01 96.2% 100.0%
6fxsA00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.59 49.0 5.04e-01 99.4% 92.6%
3ecaA02 3.40.50.40 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 40.0 4.65e-01 98.1% 96.5%
3qd5A00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.58 48.0 4.82e-01 99.4% 86.9%
2xwpA01 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 45.0 4.90e-01 99.4% 100.0%
4lflB00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.56 45.0 4.41e-01 98.1% 77.9%
1kc0A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 51.0 4.11e-01 98.7% 91.9%
2ywrA00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.56 51.0 4.60e-01 98.7% 92.1%
1b1aA00 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.55 44.0 4.70e-01 98.1% 99.3%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.54 45.0 4.76e-01 93.7% 100.0%
1k92A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 44.0 4.40e-01 84.9% 84.4%
2ac2A01 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 45.0 4.45e-01 89.9% 100.0%
4nzpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 42.0 4.50e-01 82.4% 94.9%
2z0rA00 3.40.1350.90 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › Uncharacterised protein PF11572, DUF3234 0.53 25.0 3.18e-01 90.6% 72.2%
1toaA02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.53 39.0 4.19e-01 93.1% 91.6%
4xfjB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.53 43.0 4.17e-01 84.3% 90.8%
3u7iA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.53 46.0 4.14e-01 94.3% 97.2%
5zeeB00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.53 45.0 3.71e-01 93.7% 98.3%
1zu4A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 3.90e-01 90.6% 76.6%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5046589 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.94 91.0 7.12e-01 100.0% 79.7%
3058602 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.93 91.0 6.72e-01 100.0% 76.1%
5068623 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.93 91.0 6.94e-01 100.0% 75.2%
4160428 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.93 91.0 7.05e-01 100.0% 75.0%
5075070 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.93 90.0 6.74e-01 100.0% 85.3%
4988707 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.93 90.0 6.87e-01 100.0% 83.7%
4371293 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.93 91.0 7.11e-01 100.0% 76.2%
5078620 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 90.0 6.73e-01 100.0% 78.8%
5081226 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 89.0 6.82e-01 100.0% 80.6%
5074783 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 90.0 6.76e-01 100.0% 88.2%
5044850 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 90.0 6.72e-01 100.0% 77.6%
1087839 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 90.0 6.75e-01 100.0% 78.4%
4477069 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 90.0 7.00e-01 100.0% 78.6%
4403882 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 89.0 6.73e-01 100.0% 76.4%
5027805 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 89.0 6.91e-01 100.0% 81.3%
4030607 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 89.0 6.85e-01 100.0% 79.4%
5038734 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 89.0 6.67e-01 100.0% 79.9%
3191545 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.92 88.0 6.48e-01 100.0% 86.0%
4981610 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.91 89.0 6.41e-01 100.0% 78.7%
5071849 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.91 89.0 6.75e-01 100.0% 85.0%
4971082 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.91 89.0 6.72e-01 100.0% 80.0%
4945483 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.91 88.0 6.56e-01 100.0% 76.5%
3683544 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.91 88.0 6.12e-01 100.0% 73.0%
5080864 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.91 88.0 6.72e-01 100.0% 82.2%
3484117 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.91 88.0 6.16e-01 100.0% 68.5%
3472396 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.91 87.0 6.14e-01 100.0% 68.5%
4549280 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 88.0 6.46e-01 100.0% 85.9%
4161004 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 6.56e-01 100.0% 72.8%
4936729 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 7.06e-01 100.0% 81.5%
3718448 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 6.51e-01 100.0% 82.1%
3716753 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 6.40e-01 100.0% 82.8%
3179580 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 6.34e-01 100.0% 77.8%
3809746 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 6.44e-01 100.0% 68.6%
3184490 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.90 87.0 6.51e-01 100.0% 71.8%
4014875 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.90 87.0 6.87e-01 100.0% 78.1%
5027545 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.89 72.0 5.75e-01 81.8% 90.5%
3723355 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.89 86.0 6.67e-01 100.0% 84.4%
5057427 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.89 87.0 6.71e-01 100.0% 74.1%
4837365 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.89 86.0 6.98e-01 100.0% 80.4%
4948587 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.88 83.0 7.38e-01 96.9% 87.6%
5038789 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.88 85.0 6.67e-01 100.0% 78.6%
3349028 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.87 84.0 6.03e-01 100.0% 68.5%
152979 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.86 83.0 6.69e-01 100.0% 93.5%
3338294 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.85 82.0 6.02e-01 100.0% 72.2%
5069080 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.84 80.0 6.09e-01 100.0% 79.7%
3372631 2499.1.1.1 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 0.78 75.0 5.46e-01 100.0% 69.5%
4643881 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.72 46.0 4.92e-01 100.0% 73.6%
4995976 2004.1.1.1208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP-bdg_N 0.61 40.0 3.95e-01 91.2% 59.4%
3797618 7590.1.1.0 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs 0.60 48.0 4.66e-01 98.7% 76.6%
2490228 7560.1.1.1 a/b three-layered sandwiches › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › LacAB_rpiB 0.59 49.0 5.00e-01 99.4% 90.3%
4956359 7566.1.1.2 a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N 0.59 40.0 3.82e-01 89.9% 58.4%
3963406 2007.1.14.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › ZnuA 0.56 39.0 4.26e-01 93.1% 88.3%
3722236 7604.1.1.1 a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N 0.56 46.0 4.89e-01 91.2% 100.0%
4984677 2007.1.14.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.54 38.0 4.17e-01 96.9% 88.5%
3217982 2006.1.6.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.54 49.0 4.45e-01 100.0% 92.7%
4954782 2007.1.14.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like 0.54 36.0 4.16e-01 98.7% 97.3%
4330211 7604.1.1.1 a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N 0.54 44.0 4.70e-01 91.2% 99.3%
5009743 7604.1.1.1 a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N 0.54 44.0 4.67e-01 98.1% 98.6%
4125740 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.54 46.0 3.99e-01 93.1% 98.0%
4031137 2007.19.1.1 a/b three-layered sandwiches › Flavodoxin-like › Glycerate kinase I (Pfam 02595) domain I › Glycerate kinase I (Pfam 02595) domain I › Gly_kinase 0.54 46.0 4.73e-01 95.0% 100.0%
5027298 7566.1.1.2 a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N 0.53 39.0 3.58e-01 83.6% 56.7%
5003740 7512.1.1.8 a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Epimerase_2 0.53 46.0 4.23e-01 94.3% 99.0%
5039447 7604.1.1.1 a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N 0.53 43.0 4.57e-01 98.7% 98.6%
3955666 7604.1.1.1 a/b three-layered sandwiches › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › a/b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_N 0.53 41.0 4.46e-01 91.2% 100.0%
4991646 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.52 45.0 3.30e-01 94.3% 86.5%
4078594 2005.1.1.8 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Arginosuc_synth 0.52 41.0 3.91e-01 83.0% 91.9%
5033858 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.52 44.0 3.47e-01 93.1% 90.1%
5079252 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.51 44.0 3.24e-01 93.7% 56.8%
3665075 7514.1.1.1 a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › NAD_binding_1 0.51 31.0 3.30e-01 71.7% 64.8%
D6 medium residues 482-570
PDB
D7 medium residues 573-618_725-809
PDB
D8 medium residues 1000-1026_1064-1091
PDB
D9 medium residues 1202-1300
PDB
D10 medium residues 1768-1820
PDB