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NODE_12_length_310542_cov_175.846709.1__X__X__00097
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00097
Identity
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-66
Domain cluster:
rep: MT939240.1__QOC57461.1__phi9181_ORF091__00091__D3-61
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.73 | 64.0 | 5.44e-01 | 100.0% | 86.8% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.72 | 62.0 | 5.30e-01 | 96.9% | 85.6% |
| 3ng0A01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.69 | 61.0 | 5.22e-01 | 100.0% | 86.4% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.67 | 54.0 | 4.72e-01 | 87.5% | 78.9% |
| 4hppA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.67 | 51.0 | 4.45e-01 | 84.4% | 87.1% |
| 3u2sC00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 51.0 | 4.61e-01 | 85.9% | 100.0% |
| 2pmvA02 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.64 | 51.0 | 4.31e-01 | 87.5% | 96.3% |
| 1vk6A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 49.0 | 3.92e-01 | 84.4% | 60.3% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 41.0 | 2.79e-01 | 100.0% | 18.4% |
| 3u7zA00 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.60 | 48.0 | 4.19e-01 | 87.5% | 94.8% |
| 3vqiD03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 47.0 | 4.46e-01 | 85.9% | 98.7% |
| 3cxgA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 41.0 | 3.35e-01 | 75.0% | 72.1% |
| 2ww8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.85e-01 | 85.9% | 95.3% |
| 6scxA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.58 | 44.0 | 3.51e-01 | 84.4% | 60.0% |
| 2kkcA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 45.0 | 3.94e-01 | 87.5% | 97.0% |
| 1hezE00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 45.0 | 4.61e-01 | 87.5% | 98.4% |
| 1yelA00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 48.0 | 4.20e-01 | 100.0% | 82.4% |
| 5eb9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.03e-01 | 100.0% | 93.8% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 43.0 | 3.53e-01 | 93.8% | 44.2% |
| 1wiaA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 42.0 | 4.14e-01 | 84.4% | 97.1% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.54 | 40.0 | 4.23e-01 | 87.5% | 96.4% |
| 3ds8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 39.0 | 2.62e-01 | 100.0% | 19.4% |
| 7pzaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 43.0 | 3.55e-01 | 93.8% | 46.7% |
| 6u7tA03 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 40.0 | 3.38e-01 | 85.9% | 66.1% |
| 3c7aA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 3.22e-01 | 98.4% | 73.7% |
| 1z2mA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 41.0 | 3.94e-01 | 87.5% | 93.5% |
| 1krhA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 40.0 | 3.48e-01 | 84.4% | 91.3% |
| 1mhxA00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 42.0 | 4.19e-01 | 87.5% | 87.7% |
| 3c65A00 | 3.30.420.340 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain | 0.52 | 40.0 | 3.20e-01 | 89.1% | 87.4% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 41.0 | 3.35e-01 | 93.8% | 43.3% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 3.14e-01 | 73.4% | 68.9% |
| 1v2yA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 40.0 | 3.50e-01 | 87.5% | 83.8% |
| 1wghA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.62e-01 | 84.4% | 96.4% |
| 3rhaA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 35.0 | 2.16e-01 | 73.4% | 36.6% |
| 3aiiA02 | 2.40.240.100 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.51 | 43.0 | 4.35e-01 | 100.0% | 95.3% |
| 3qc8B00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.64e-01 | 84.4% | 92.5% |
| 2cr5A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 39.0 | 3.66e-01 | 85.9% | 92.5% |
| 5jnmA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 41.0 | 3.07e-01 | 100.0% | 76.8% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946703 | 239.4.1.4 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_C | 0.73 | 61.0 | 5.68e-01 | 92.2% | 98.8% |
| 2702147 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.72 | 62.0 | 5.55e-01 | 96.9% | 93.4% |
| 2557339 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.72 | 63.0 | 5.33e-01 | 100.0% | 84.3% |
| 4991736 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.72 | 64.0 | 5.50e-01 | 100.0% | 88.0% |
| 2391550 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.71 | 63.0 | 5.32e-01 | 100.0% | 86.9% |
| 3481630 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.71 | 63.0 | 4.96e-01 | 98.4% | 91.5% |
| 5011560 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.71 | 62.0 | 5.22e-01 | 96.9% | 87.6% |
| 3258650 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.70 | 61.0 | 5.80e-01 | 100.0% | 97.4% |
| 4945123 | 239.4.1.4 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_C | 0.70 | 61.0 | 5.43e-01 | 96.9% | 91.1% |
| 4230721 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.70 | 61.0 | 5.36e-01 | 98.4% | 91.6% |
| 4020877 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.70 | 60.0 | 5.11e-01 | 96.9% | 92.4% |
| 4071928 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.69 | 60.0 | 5.07e-01 | 98.4% | 91.8% |
| 3891585 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.69 | 60.0 | 5.05e-01 | 98.4% | 90.0% |
| 5024396 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.69 | 60.0 | 5.20e-01 | 98.4% | 90.0% |
| 3973350 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.69 | 59.0 | 5.01e-01 | 98.4% | 90.9% |
| 4955866 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.66 | 57.0 | 5.16e-01 | 98.4% | 88.9% |
| 4996016 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.66 | 52.0 | 3.97e-01 | 89.1% | 68.1% |
| 3973596 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.66 | 50.0 | 4.48e-01 | 84.4% | 92.6% |
| 4069054 | 221.1.1.24 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblB | 0.66 | 51.0 | 4.55e-01 | 85.9% | 95.7% |
| 2889689 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.65 | 56.0 | 4.95e-01 | 100.0% | 91.0% |
| 3443390 | 221.1.1.28 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SOK | 0.63 | 50.0 | 4.30e-01 | 87.5% | 95.2% |
| 3940759 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 47.0 | 4.27e-01 | 85.9% | 90.0% |
| 4927129 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.61 | 50.0 | 4.43e-01 | 95.3% | 83.0% |
| 3827296 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.60 | 37.0 | 3.08e-01 | 84.4% | 36.4% |
| 4275209 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.60 | 46.0 | 3.41e-01 | 85.9% | 58.3% |
| 3493732 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 47.0 | 4.18e-01 | 87.5% | 92.6% |
| 4204225 | 221.2.1.1 ↗ | a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N | 0.60 | 48.0 | 4.44e-01 | 96.9% | 69.4% |
| 3412800 | 3118.1.1.1 ↗ | a+b two layers › C-terminal functional domain of REDD1 › C-terminal functional domain of REDD1 › C-terminal functional domain of REDD1 › RTP801_C | 0.58 | 46.0 | 3.73e-01 | 89.1% | 74.2% |
| 3635903 | 221.1.1.108 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Get5_N | 0.57 | 45.0 | 3.94e-01 | 87.5% | 93.0% |
| 5025875 | 221.3.1.10 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains › FdhD-NarQ | 0.57 | 47.0 | 4.14e-01 | 90.6% | 96.8% |
| 3717753 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 44.0 | 3.99e-01 | 85.9% | 95.6% |
| 4235474 | 4237.1.1.1 ↗ | beta barrels › FomD-like › FomD-like › FomD-like › DUF402 | 0.57 | 44.0 | 3.41e-01 | 89.1% | 62.8% |
| 3706447 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 43.0 | 3.63e-01 | 87.5% | 79.2% |
| 3919290 | 243.1.1.91 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 | 0.56 | 47.0 | 3.80e-01 | 100.0% | 90.0% |
| 4949222 | 225.2.1.1 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › Uncharacterized protein DIP2311 middle domain › Uncharacterized protein DIP2311 middle domain › HATPase_c_4 | 0.56 | 44.0 | 2.91e-01 | 87.5% | 35.5% |
| 3489398 | 221.1.1.16 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › TGS | 0.56 | 43.0 | 3.93e-01 | 85.9% | 84.1% |
| 3937933 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.56 | 45.0 | 4.17e-01 | 87.5% | 92.5% |
| 4384069 | 243.1.1.91 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 | 0.55 | 47.0 | 3.71e-01 | 100.0% | 84.0% |
| 3926362 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 42.0 | 3.53e-01 | 85.9% | 85.8% |
| 3666530 | 221.1.1.111 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiq_DUF_assoc | 0.55 | 46.0 | 3.78e-01 | 96.9% | 81.6% |
| 4580723 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.55 | 46.0 | 3.35e-01 | 98.4% | 75.5% |
| 3728407 | 386.1.1.16 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Hat1_N | 0.54 | 43.0 | 3.54e-01 | 85.9% | 87.0% |
| 2883953 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.54 | 43.0 | 3.99e-01 | 87.5% | 87.8% |
| 3707442 | 221.1.1.8 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd | 0.54 | 45.0 | 3.23e-01 | 96.9% | 57.6% |
| 5022325 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.54 | 42.0 | 3.64e-01 | 85.9% | 72.0% |
| 3487176 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 42.0 | 3.64e-01 | 87.5% | 72.8% |
| 5069740 | 11.1.4.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg | 0.53 | 42.0 | 3.87e-01 | 87.5% | 97.6% |
| 4116624 | 2003.1.5.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 | 0.53 | 39.0 | 2.72e-01 | 84.4% | 82.6% |
| 4059008 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.52 | 42.0 | 4.20e-01 | 92.2% | 87.7% |
| 4155771 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 40.0 | 3.24e-01 | 82.8% | 44.2% |
| 3832075 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.51 | 33.0 | 1.99e-01 | 100.0% | 8.8% |
| 3293330 | 221.1.1.59 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_4 | 0.51 | 40.0 | 3.59e-01 | 87.5% | 90.5% |
| 1170111 | 243.1.1.27 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4348 | 0.51 | 43.0 | 3.68e-01 | 98.4% | 88.3% |
| 4449990 | 60.1.1.12 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Treslin_M | 0.51 | 39.0 | 3.08e-01 | 87.5% | 68.7% |
| 3787280 | 2003.1.1.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › ApbA | 0.51 | 43.0 | 3.16e-01 | 100.0% | 72.3% |
| 3720434 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 35.0 | 2.63e-01 | 93.8% | 25.4% |
| 3354899 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.50 | 40.0 | 3.39e-01 | 92.2% | 64.4% |
| 3239281 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.50 | 38.0 | 3.02e-01 | 85.9% | 51.7% |
| 3262427 | 221.1.1.7 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX | 0.50 | 38.0 | 3.51e-01 | 85.9% | 84.4% |
D2
high
residues 73-126
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dzlA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.81 | 59.0 | 5.52e-01 | 77.8% | 66.7% |
| 2ejsA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.79 | 62.0 | 6.08e-01 | 88.9% | 79.3% |
| 2l2dA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.78 | 55.0 | 5.02e-01 | 75.9% | 57.5% |
| 2l4eA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 54.0 | 5.40e-01 | 79.6% | 77.2% |
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 58.0 | 5.70e-01 | 87.0% | 86.4% |
| 1a5tA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.75 | 51.0 | 5.48e-01 | 72.2% | 100.0% |
| 4wp2A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 56.0 | 5.50e-01 | 87.0% | 78.7% |
| 1sxjA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 59.0 | 5.40e-01 | 90.7% | 98.6% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.73 | 54.0 | 5.33e-01 | 83.3% | 78.3% |
| 1aipH03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 52.0 | 5.31e-01 | 81.5% | 84.6% |
| 6vvoC02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 55.0 | 5.26e-01 | 92.6% | 90.6% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 56.0 | 5.22e-01 | 94.4% | 90.0% |
| 3t15A02 | 1.10.8.1070 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 53.0 | 4.37e-01 | 90.7% | 81.5% |
| 1bvsA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.68 | 48.0 | 4.40e-01 | 74.1% | 97.1% |
| 2ekfA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 51.0 | 5.34e-01 | 90.7% | 97.8% |
| 4m70B00 | 1.10.246.200 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain | 0.65 | 46.0 | 3.98e-01 | 77.8% | 85.7% |
| 2d6fC03 | 1.10.150.380 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › GatB domain, N-terminal subdomain | 0.64 | 47.0 | 4.75e-01 | 90.7% | 84.6% |
| 1bpbA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.61 | 44.0 | 4.35e-01 | 79.6% | 77.6% |
| 6pe0E01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 45.0 | 4.53e-01 | 79.6% | 92.5% |
| 1mswD04 | 1.10.287.280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 38.0 | 3.45e-01 | 72.2% | 66.7% |
| 2ziwB02 | 1.10.150.670 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain | 0.55 | 46.0 | 3.90e-01 | 100.0% | 90.8% |
| 2c35A00 | 1.20.1250.40 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › RNA Polymerase II, Rpb4 subunit | 0.55 | 43.0 | 3.31e-01 | 87.0% | 85.2% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.53 | 39.0 | 3.17e-01 | 81.5% | 53.2% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3581450 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.83 | 64.0 | 6.43e-01 | 87.0% | 81.8% |
| 3929159 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.80 | 69.0 | 6.73e-01 | 96.3% | 91.7% |
| 3832034 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.80 | 68.0 | 6.60e-01 | 96.3% | 88.3% |
| 3173093 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.79 | 65.0 | 6.35e-01 | 92.6% | 83.3% |
| 4022320 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.79 | 65.0 | 6.75e-01 | 92.6% | 100.0% |
| 3995392 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.79 | 56.0 | 6.01e-01 | 75.9% | 95.6% |
| 3428162 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.79 | 65.0 | 6.47e-01 | 92.6% | 92.7% |
| 3582407 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.79 | 66.0 | 6.12e-01 | 96.3% | 78.6% |
| 3537150 | 103.1.1.2 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CUE | 0.79 | 61.0 | 6.14e-01 | 88.9% | 83.6% |
| 3827604 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.78 | 66.0 | 6.11e-01 | 96.3% | 75.7% |
| 3491916 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.78 | 65.0 | 5.81e-01 | 96.3% | 66.3% |
| 3741413 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.78 | 65.0 | 6.36e-01 | 96.3% | 88.3% |
| 3266958 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 61.0 | 6.00e-01 | 92.6% | 85.0% |
| 2700982 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.76 | 63.0 | 5.98e-01 | 96.3% | 79.1% |
| 3591175 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.76 | 64.0 | 6.06e-01 | 96.3% | 81.5% |
| 3782680 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 63.0 | 6.17e-01 | 94.4% | 91.7% |
| 3201095 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.76 | 63.0 | 5.90e-01 | 96.3% | 75.7% |
| 3703314 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.76 | 58.0 | 5.63e-01 | 83.3% | 78.3% |
| 3519403 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.76 | 62.0 | 5.88e-01 | 92.6% | 92.3% |
| 3272149 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.75 | 54.0 | 5.76e-01 | 79.6% | 100.0% |
| 3873737 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.74 | 62.0 | 6.03e-01 | 96.3% | 88.3% |
| 3617081 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.74 | 51.0 | 5.54e-01 | 72.2% | 100.0% |
| 3550319 | 103.1.1.91 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28552 | 0.74 | 55.0 | 5.67e-01 | 81.5% | 90.0% |
| 3367165 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.74 | 61.0 | 5.98e-01 | 96.3% | 88.3% |
| 3975944 | 103.1.1.37 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › YccJ | 0.74 | 62.0 | 5.71e-01 | 96.3% | 72.9% |
| 3522732 | 103.1.1.143 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_ARIH2_N | 0.73 | 61.0 | 5.67e-01 | 96.3% | 75.7% |
| 3803934 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 61.0 | 6.08e-01 | 96.3% | 96.4% |
| 3680871 | 103.1.1.22 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › ARI1_UBAl | 0.73 | 60.0 | 5.36e-01 | 94.4% | 68.8% |
| 3737217 | 103.1.1.9 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › HBS1_N | 0.73 | 54.0 | 4.98e-01 | 79.6% | 71.4% |
| 3483851 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.73 | 53.0 | 5.59e-01 | 79.6% | 97.8% |
| 4373562 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.73 | 50.0 | 5.37e-01 | 72.2% | 100.0% |
| 3501828 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.73 | 59.0 | 6.08e-01 | 96.3% | 98.0% |
| 3255224 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.73 | 59.0 | 5.79e-01 | 96.3% | 90.0% |
| 3608656 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.73 | 51.0 | 5.42e-01 | 75.9% | 100.0% |
| 3261051 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.72 | 56.0 | 5.48e-01 | 87.0% | 85.0% |
| 3749044 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.72 | 58.0 | 5.72e-01 | 94.4% | 85.0% |
| 3568120 | 103.1.1.84 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › PF28540 | 0.72 | 59.0 | 5.89e-01 | 98.1% | 92.7% |
| 3707633 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.71 | 57.0 | 5.91e-01 | 98.1% | 100.0% |
| 3758209 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.71 | 55.0 | 5.37e-01 | 88.9% | 78.3% |
| 3658332 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.70 | 51.0 | 5.25e-01 | 81.5% | 90.0% |
| 3904505 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.70 | 48.0 | 5.21e-01 | 72.2% | 100.0% |
| 4465202 | 103.1.1.1 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA | 0.70 | 53.0 | 5.30e-01 | 83.3% | 81.8% |
| 3654157 | 103.1.1.27 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_7 | 0.70 | 58.0 | 5.86e-01 | 98.1% | 96.4% |
| 4025664 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.70 | 53.0 | 5.49e-01 | 87.0% | 92.0% |
| 3435282 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.70 | 56.0 | 5.52e-01 | 96.3% | 90.0% |
| 4123674 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.69 | 53.0 | 5.30e-01 | 85.2% | 83.6% |
| 3180404 | 103.1.1.14 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_4 | 0.69 | 55.0 | 5.70e-01 | 94.4% | 100.0% |
| 3383233 | 103.1.1.27 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_7 | 0.69 | 57.0 | 4.34e-01 | 100.0% | 37.9% |
| 4604226 | 103.1.1.135 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA, EF-Ts_N | 0.68 | 52.0 | 5.23e-01 | 87.0% | 83.6% |
| 4970811 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.66 | 51.0 | 4.72e-01 | 90.7% | 64.0% |
| 2095911 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.66 | 48.0 | 5.14e-01 | 81.5% | 100.0% |
| 2675235 | 148.1.3.32 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RuBisCO_activase_AAA_helical | 0.63 | 48.0 | 3.88e-01 | 90.7% | 69.6% |
| 3421573 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.61 | 42.0 | 4.12e-01 | 72.2% | 69.0% |
| 3354602 | 148.1.3.32 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RuBisCO_activase_AAA_helical | 0.60 | 47.0 | 4.07e-01 | 92.6% | 69.5% |
| 2568242 | 102.1.1.21 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_pol_lambd_f | 0.60 | 45.0 | 4.39e-01 | 85.2% | 80.3% |
| 4994591 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.59 | 43.0 | 3.75e-01 | 83.3% | 69.5% |
| 3663304 | 143.1.1.0 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain | 0.57 | 41.0 | 4.05e-01 | 79.6% | 98.3% |
| 4559285 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 41.0 | 3.55e-01 | 81.5% | 90.0% |
| 3785675 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 43.0 | 4.07e-01 | 92.6% | 77.1% |
| 4939552 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.55 | 39.0 | 3.45e-01 | 77.8% | 60.2% |
| 3548976 | 102.1.1.41 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C | 0.53 | 44.0 | 3.76e-01 | 98.1% | 63.2% |