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NODE_12_length_310542_cov_175.846709.1__X__X__00123
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00123
Identity
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-68
Domain cluster:
rep: NC_042140.1__YP_009626744.1__FD732_gp150__00178__D103-155
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.88 | 69.0 | 7.20e-01 | 96.9% | 91.5% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 65.0 | 6.55e-01 | 93.8% | 78.5% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 63.0 | 6.71e-01 | 92.3% | 89.3% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 74.0 | 6.86e-01 | 100.0% | 76.2% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 69.0 | 7.08e-01 | 100.0% | 91.9% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 69.0 | 7.20e-01 | 100.0% | 96.6% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 66.0 | 6.51e-01 | 100.0% | 80.9% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 65.0 | 6.30e-01 | 100.0% | 75.3% |
| 3mp6A05 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 63.0 | 6.44e-01 | 100.0% | 85.7% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 60.0 | 5.63e-01 | 100.0% | 66.3% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 71.0 | 6.83e-01 | 100.0% | 88.9% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 65.0 | 6.17e-01 | 95.4% | 77.6% |
| 3askA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 66.0 | 6.73e-01 | 100.0% | 98.4% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.76 | 67.0 | 4.77e-01 | 100.0% | 65.8% |
| 7xpkA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.74 | 67.0 | 5.10e-01 | 100.0% | 60.7% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 60.0 | 6.16e-01 | 92.3% | 93.5% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.73 | 65.0 | 5.71e-01 | 98.5% | 87.4% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 66.0 | 5.18e-01 | 100.0% | 48.9% |
| 2vgmA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.73 | 64.0 | 5.22e-01 | 100.0% | 62.3% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 65.0 | 4.94e-01 | 100.0% | 44.4% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 57.0 | 5.80e-01 | 100.0% | 87.7% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 63.0 | 6.15e-01 | 96.9% | 90.0% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 63.0 | 4.96e-01 | 100.0% | 96.2% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.70 | 62.0 | 4.99e-01 | 100.0% | 63.8% |
| 3meuB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 62.0 | 6.00e-01 | 100.0% | 95.9% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 55.0 | 5.62e-01 | 89.2% | 90.3% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.70 | 59.0 | 5.00e-01 | 100.0% | 56.9% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.70 | 60.0 | 5.15e-01 | 100.0% | 60.6% |
| 1txqA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.69 | 61.0 | 5.88e-01 | 96.9% | 98.6% |
| 1ixdA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.68 | 61.0 | 5.21e-01 | 100.0% | 74.0% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.68 | 61.0 | 5.81e-01 | 98.5% | 86.7% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 61.0 | 5.84e-01 | 100.0% | 86.7% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 58.0 | 5.23e-01 | 100.0% | 85.6% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.64 | 58.0 | 4.95e-01 | 100.0% | 75.5% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 53.0 | 3.41e-01 | 95.4% | 26.1% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.63 | 53.0 | 3.38e-01 | 93.8% | 40.9% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.63 | 46.0 | 3.34e-01 | 78.5% | 44.1% |
| 3pftA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 46.0 | 3.44e-01 | 78.5% | 50.6% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 53.0 | 4.21e-01 | 100.0% | 63.8% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.61 | 43.0 | 3.82e-01 | 100.0% | 53.3% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.61 | 52.0 | 4.09e-01 | 95.4% | 84.8% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 50.0 | 3.70e-01 | 93.8% | 77.7% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.60 | 48.0 | 4.52e-01 | 100.0% | 72.2% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 51.0 | 4.89e-01 | 100.0% | 83.1% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 48.0 | 3.84e-01 | 93.8% | 93.0% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.58 | 43.0 | 4.25e-01 | 83.1% | 75.4% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.58 | 45.0 | 4.34e-01 | 100.0% | 74.7% |
| 1sg5A01 | 2.30.30.400 | Mainly Beta › Roll › SH3 type barrels. › Rof-like | 0.58 | 50.0 | 4.77e-01 | 100.0% | 85.7% |
| 2cg7A02 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.57 | 36.0 | 4.08e-01 | 75.4% | 93.2% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.57 | 49.0 | 4.71e-01 | 98.5% | 90.8% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.57 | 49.0 | 4.27e-01 | 98.5% | 63.5% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 41.0 | 3.36e-01 | 93.8% | 40.8% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.56 | 50.0 | 3.48e-01 | 100.0% | 96.7% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 45.0 | 3.68e-01 | 93.8% | 90.2% |
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 49.0 | 3.27e-01 | 100.0% | 90.3% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.54 | 42.0 | 3.86e-01 | 100.0% | 62.6% |
| 3cqnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 46.0 | 3.52e-01 | 100.0% | 68.9% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.53 | 37.0 | 4.11e-01 | 80.0% | 100.0% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.53 | 44.0 | 2.94e-01 | 93.8% | 36.0% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.52 | 42.0 | 3.24e-01 | 92.3% | 42.9% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 41.0 | 3.66e-01 | 93.8% | 82.1% |
| 1zu0A02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.51 | 45.0 | 3.79e-01 | 96.9% | 98.1% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 39.0 | 3.93e-01 | 87.7% | 92.6% |
| 3bxoA02 | 2.20.130.10 | Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains | 0.51 | 40.0 | 4.18e-01 | 92.3% | 94.9% |
| 1rz1A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 40.0 | 3.20e-01 | 93.8% | 44.1% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3905549 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.88 | 74.0 | 6.17e-01 | 100.0% | 55.2% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.87 | 72.0 | 6.16e-01 | 100.0% | 58.0% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 72.0 | 7.07e-01 | 100.0% | 82.9% |
| 3394215 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.86 | 75.0 | 6.42e-01 | 100.0% | 61.0% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 71.0 | 6.78e-01 | 100.0% | 77.3% |
| 4420173 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.85 | 69.0 | 6.53e-01 | 100.0% | 74.7% |
| 3940730 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 72.0 | 6.30e-01 | 100.0% | 63.2% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.84 | 66.0 | 4.64e-01 | 100.0% | 30.0% |
| 4427477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 72.0 | 6.30e-01 | 100.0% | 64.2% |
| 3629536 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 70.0 | 6.09e-01 | 100.0% | 62.1% |
| 3330943 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.82 | 64.0 | 6.86e-01 | 100.0% | 98.2% |
| 3294392 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.82 | 64.0 | 5.81e-01 | 100.0% | 63.5% |
| 2527304 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.81 | 69.0 | 7.16e-01 | 100.0% | 98.4% |
| 3393358 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.81 | 68.0 | 5.98e-01 | 100.0% | 63.2% |
| 4069543 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.80 | 68.0 | 6.46e-01 | 100.0% | 78.7% |
| 4300449 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.80 | 63.0 | 6.31e-01 | 93.8% | 83.1% |
| 3485761 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 72.0 | 5.08e-01 | 98.5% | 50.6% |
| 3625963 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.78 | 68.0 | 5.98e-01 | 100.0% | 65.3% |
| 3272197 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 71.0 | 6.00e-01 | 100.0% | 68.6% |
| 3521904 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 71.0 | 6.19e-01 | 100.0% | 85.3% |
| 3327160 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.77 | 69.0 | 5.21e-01 | 100.0% | 67.7% |
| 3309829 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 69.0 | 5.16e-01 | 100.0% | 53.1% |
| 3886139 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.77 | 68.0 | 6.80e-01 | 100.0% | 93.8% |
| 3553413 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.77 | 69.0 | 6.22e-01 | 98.5% | 74.1% |
| 3621303 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 70.0 | 5.48e-01 | 100.0% | 63.8% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.76 | 60.0 | 6.08e-01 | 89.2% | 84.6% |
| 4956630 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.76 | 65.0 | 4.90e-01 | 100.0% | 39.4% |
| 3830813 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.76 | 69.0 | 4.91e-01 | 100.0% | 47.0% |
| 3622425 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.76 | 65.0 | 5.29e-01 | 100.0% | 50.8% |
| 3851361 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.76 | 69.0 | 5.83e-01 | 100.0% | 73.3% |
| 3584109 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 69.0 | 5.28e-01 | 100.0% | 72.9% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.76 | 64.0 | 5.00e-01 | 100.0% | 45.4% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.76 | 68.0 | 6.67e-01 | 98.5% | 95.7% |
| 3848399 | 4.8.1.24 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th | 0.75 | 68.0 | 6.64e-01 | 98.5% | 90.0% |
| 3768116 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.75 | 68.0 | 4.63e-01 | 100.0% | 29.8% |
| 3791777 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.75 | 67.0 | 6.08e-01 | 96.9% | 91.8% |
| 5012425 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.75 | 68.0 | 5.23e-01 | 100.0% | 60.0% |
| 3888395 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.75 | 68.0 | 6.24e-01 | 100.0% | 92.9% |
| 3991229 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.74 | 67.0 | 4.96e-01 | 100.0% | 70.3% |
| 3496040 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.74 | 68.0 | 5.01e-01 | 100.0% | 53.8% |
| 3673944 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.74 | 68.0 | 5.10e-01 | 100.0% | 91.3% |
| 4002655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 67.0 | 5.15e-01 | 100.0% | 65.0% |
| 3401387 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.74 | 67.0 | 4.79e-01 | 100.0% | 45.6% |
| 3617741 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 66.0 | 4.64e-01 | 100.0% | 57.6% |
| 3998386 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.74 | 67.0 | 5.46e-01 | 98.5% | 66.1% |
| 609 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.74 | 65.0 | 5.30e-01 | 100.0% | 60.7% |
| 3482360 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 67.0 | 5.99e-01 | 100.0% | 94.4% |
| 3631313 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.73 | 66.0 | 4.69e-01 | 100.0% | 43.7% |
| 3926950 | 4.1.1.214 ↗ | beta barrels › SH3 › SH3 › SH3 › GCN5L1 | 0.73 | 63.0 | 5.11e-01 | 93.8% | 62.5% |
| 647 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.73 | 66.0 | 5.18e-01 | 100.0% | 48.9% |
| 3177469 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 61.0 | 6.02e-01 | 92.3% | 87.1% |
| 3932647 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.72 | 63.0 | 5.79e-01 | 100.0% | 74.1% |
| 3615426 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.72 | 65.0 | 4.90e-01 | 100.0% | 46.7% |
| 4932882 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.72 | 63.0 | 5.00e-01 | 100.0% | 63.7% |
| 4013811 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.72 | 64.0 | 5.77e-01 | 100.0% | 86.7% |
| 3406338 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.72 | 66.0 | 5.35e-01 | 100.0% | 67.0% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.71 | 65.0 | 4.84e-01 | 100.0% | 43.9% |
| 3625263 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 65.0 | 5.60e-01 | 100.0% | 72.0% |
| 3823780 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.71 | 63.0 | 5.98e-01 | 100.0% | 84.0% |
| 3740221 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.71 | 63.0 | 4.73e-01 | 100.0% | 54.4% |
| 3902233 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.71 | 63.0 | 4.70e-01 | 100.0% | 60.6% |
| 5036729 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.70 | 61.0 | 5.06e-01 | 100.0% | 65.8% |
| 2760811 | 4.8.1.7 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE | 0.70 | 55.0 | 5.51e-01 | 89.2% | 84.8% |
| 4300895 | 4.11.1.6 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 | 0.70 | 63.0 | 4.86e-01 | 100.0% | 48.6% |
| 3918912 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 61.0 | 4.56e-01 | 100.0% | 55.0% |
| 608 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.70 | 60.0 | 5.15e-01 | 100.0% | 60.6% |
| 3185466 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.70 | 62.0 | 4.39e-01 | 100.0% | 39.0% |
| 2978978 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.70 | 62.0 | 5.89e-01 | 98.5% | 90.7% |
| 3924760 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 63.0 | 5.62e-01 | 100.0% | 72.2% |
| 3205559 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.69 | 61.0 | 4.73e-01 | 100.0% | 55.9% |
| 3720660 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 63.0 | 5.97e-01 | 100.0% | 88.0% |
| 3594413 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.69 | 63.0 | 5.83e-01 | 100.0% | 92.5% |
| 4931113 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.69 | 61.0 | 5.12e-01 | 100.0% | 59.1% |
| 3786396 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.68 | 62.0 | 4.88e-01 | 100.0% | 53.8% |
| 3448975 | 4.1.1.66 ↗ | beta barrels › SH3 › SH3 › SH3 › LBR_tudor | 0.68 | 59.0 | 5.95e-01 | 98.5% | 95.4% |
| 3301015 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 5.96e-01 | 100.0% | 96.9% |
| 3476336 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.68 | 62.0 | 6.03e-01 | 100.0% | 97.1% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 61.0 | 4.73e-01 | 100.0% | 97.1% |
| 3546727 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 56.0 | 4.80e-01 | 93.8% | 71.3% |
| 4523548 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.67 | 56.0 | 5.11e-01 | 90.8% | 78.8% |
| 3761319 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.67 | 59.0 | 6.00e-01 | 98.5% | 100.0% |
| 4004815 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.66 | 59.0 | 4.77e-01 | 100.0% | 69.9% |
| 4123449 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.65 | 51.0 | 4.66e-01 | 84.6% | 72.9% |
| 5067458 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 50.0 | 5.34e-01 | 86.2% | 100.0% |
| 3555894 | 5.1.4.420 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Aladin | 0.65 | 54.0 | 3.26e-01 | 93.8% | 20.6% |
| 3803520 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 57.0 | 4.72e-01 | 100.0% | 79.2% |
| 3974490 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 53.0 | 5.01e-01 | 90.8% | 73.8% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.65 | 58.0 | 5.21e-01 | 100.0% | 74.4% |
| 3720023 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 58.0 | 5.00e-01 | 98.5% | 68.0% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.65 | 58.0 | 4.70e-01 | 100.0% | 55.0% |
| 4015757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 3.89e-01 | 100.0% | 37.1% |
| 4615629 | 4.1.1.449 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1292 | 0.63 | 52.0 | 4.75e-01 | 89.2% | 77.6% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 55.0 | 4.65e-01 | 100.0% | 60.0% |
| 3599855 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.59 | 49.0 | 3.17e-01 | 95.4% | 29.4% |
| 3959772 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.56 | 46.0 | 3.46e-01 | 92.3% | 37.0% |
| 5058622 | 5.1.9.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component | 0.51 | 42.0 | 2.88e-01 | 93.8% | 34.8% |
D2
high
residues 70-127
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 49.0 | 3.95e-01 | 79.3% | 41.8% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 44.0 | 3.70e-01 | 86.2% | 42.4% |
| 6vynC01 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.64 | 35.0 | 3.23e-01 | 94.8% | 43.2% |
| 3czhA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.63 | 53.0 | 3.16e-01 | 98.3% | 75.7% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 4.12e-01 | 79.3% | 79.0% |
| 3r72A00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.61 | 45.0 | 3.51e-01 | 77.6% | 98.4% |
| 4iw9A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 54.0 | 4.29e-01 | 96.6% | 54.9% |
| 3ab3D00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.61 | 47.0 | 3.37e-01 | 82.8% | 30.9% |
| 3lszA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 50.0 | 4.00e-01 | 96.6% | 70.4% |
| 3ff5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 48.0 | 4.98e-01 | 87.9% | 96.3% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.60 | 52.0 | 3.82e-01 | 100.0% | 53.3% |
| 4kkiA01 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.59 | 52.0 | 3.31e-01 | 100.0% | 19.9% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 46.0 | 3.62e-01 | 84.5% | 42.9% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 44.0 | 3.97e-01 | 82.8% | 58.7% |
| 1r4gA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.57 | 31.0 | 3.29e-01 | 75.9% | 56.6% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 42.0 | 3.31e-01 | 82.8% | 43.1% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.55 | 43.0 | 3.62e-01 | 91.4% | 81.1% |
| 1t33A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.55 | 46.0 | 3.46e-01 | 100.0% | 58.9% |
| 1bcrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 2.85e-01 | 89.7% | 21.7% |
| 2o4cA03 | 3.30.1370.170 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Erythronate-4-phosphate dehydrogenase, dimerisation domain | 0.54 | 38.0 | 3.41e-01 | 77.6% | 54.5% |
| 8hk0A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 42.0 | 3.52e-01 | 94.8% | 68.1% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.53 | 42.0 | 3.28e-01 | 100.0% | 44.3% |
| 1n69B00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.53 | 44.0 | 3.93e-01 | 89.7% | 80.0% |
| 3gwlA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.53 | 45.0 | 3.74e-01 | 98.3% | 69.8% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.53 | 45.0 | 3.63e-01 | 100.0% | 76.6% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.52 | 37.0 | 3.37e-01 | 81.0% | 96.6% |
| 3ftdA02 | 1.10.8.100 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain | 0.51 | 36.0 | 3.59e-01 | 89.7% | 71.4% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989157 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.74 | 64.0 | 4.11e-01 | 100.0% | 36.2% |
| 3657184 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.69 | 45.0 | 3.67e-01 | 75.9% | 35.5% |
| 4547686 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.69 | 46.0 | 4.33e-01 | 91.4% | 57.1% |
| 4568104 | 4030.1.1.23 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › Dpy19 | 0.64 | 46.0 | 4.64e-01 | 79.3% | 90.0% |
| 4030141 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.63 | 44.0 | 3.50e-01 | 72.4% | 39.1% |
| 4358 | 605.6.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like › DUF2443 | 0.62 | 46.0 | 4.16e-01 | 79.3% | 81.0% |
| 4030379 | 101.44.1.0 ↗ | alpha arrays › HTH › Helical domain in DNA-Damage-Inducible 2 (Ddi2) (DEPRECATED) › Helical domain in DNA-Damage-Inducible 2 (Ddi2) (DEPRECATED) | 0.62 | 46.0 | 3.73e-01 | 98.3% | 41.8% |
| 3944006 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.62 | 45.0 | 3.49e-01 | 81.0% | 36.0% |
| 3033368 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.62 | 52.0 | 4.18e-01 | 96.6% | 70.8% |
| 3403227 | 192.8.1.465 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › CHD5 | 0.61 | 44.0 | 3.55e-01 | 81.0% | 40.0% |
| 4283815 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.61 | 46.0 | 2.96e-01 | 81.0% | 35.6% |
| 3485316 | 109.7.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E | 0.61 | 42.0 | 3.98e-01 | 72.4% | 71.4% |
| 3827406 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.61 | 45.0 | 4.06e-01 | 84.5% | 56.5% |
| 3267823 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 41.0 | 4.33e-01 | 82.8% | 82.0% |
| 3797417 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.59 | 47.0 | 3.42e-01 | 87.9% | 75.2% |
| 3394753 | 192.5.1.12 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › PH_19 | 0.59 | 46.0 | 4.29e-01 | 84.5% | 68.6% |
| 3862550 | 3826.1.1.19 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › PH_19 | 0.59 | 46.0 | 4.42e-01 | 89.7% | 73.8% |
| 3336946 | 192.1.1.14 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › MPH2 | 0.58 | 43.0 | 4.33e-01 | 82.8% | 80.0% |
| 1560768 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.57 | 47.0 | 3.96e-01 | 94.8% | 77.5% |
| 5048825 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.56 | 46.0 | 3.04e-01 | 98.3% | 22.9% |
| 3214333 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.55 | 47.0 | 3.73e-01 | 93.1% | 80.9% |
| 3581239 | 7579.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase | 0.55 | 44.0 | 2.74e-01 | 93.1% | 16.8% |
| 4167208 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.54 | 45.0 | 4.46e-01 | 94.8% | 88.3% |
| 3399005 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.54 | 45.0 | 3.87e-01 | 91.4% | 83.3% |
| 3273958 | 198.1.1.10 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin | 0.52 | 42.0 | 3.79e-01 | 94.8% | 75.3% |