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NODE_12_length_310542_cov_175.846709.1__X__X__00127
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00127
Identity
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-62
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yshA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.65 | 36.0 | 4.24e-01 | 80.6% | 100.0% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 35.0 | 4.34e-01 | 83.9% | 97.0% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.58 | 40.0 | 3.09e-01 | 72.6% | 45.7% |
| 1fjrA02 | 2.170.180.11 | Mainly Beta › Beta Complex › Methuselah ectodomain, domain 2 › Methuselah ectodomain, domain 2 | 0.56 | 40.0 | 3.21e-01 | 75.8% | 90.4% |
| 7o06C01 | 3.30.1470.10 | Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II | 0.54 | 37.0 | 3.39e-01 | 74.2% | 51.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3253285 | 304.8.1.76 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF28943 | 0.67 | 38.0 | 2.95e-01 | 82.3% | 29.2% |
| 3263562 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.67 | 43.0 | 4.54e-01 | 71.0% | 74.5% |
| 4003256 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.66 | 41.0 | 4.46e-01 | 82.3% | 78.0% |
| 3583479 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 41.0 | 4.75e-01 | 82.3% | 100.0% |
| 1033394 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.64 | 44.0 | 4.78e-01 | 74.2% | 90.0% |
| 3781064 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.59 | 41.0 | 3.94e-01 | 85.5% | 62.9% |
| 3748902 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.59 | 41.0 | 4.02e-01 | 74.2% | 80.0% |
| 3720304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 43.0 | 4.58e-01 | 88.7% | 98.0% |
| 3733331 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.58 | 43.0 | 3.61e-01 | 82.3% | 69.6% |
| 3194124 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.58 | 43.0 | 3.00e-01 | 82.3% | 39.6% |
| 4889754 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.58 | 38.0 | 3.87e-01 | 80.6% | 70.0% |
| 4028139 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.57 | 38.0 | 3.99e-01 | 71.0% | 78.2% |
| 1396826 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.53 | 38.0 | 3.75e-01 | 82.3% | 71.6% |
| 3584345 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.53 | 29.0 | 2.31e-01 | 72.6% | 23.0% |
| 4012190 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 2.85e-01 | 100.0% | 87.3% |
| 4433750 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 42.0 | 2.59e-01 | 95.2% | 93.3% |