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NODE_12_length_310542_cov_175.846709.1__X__X__00157
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00157
Identity
- Kingdom:
- phage
Quality
75.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-203
Domain cluster:
rep: MZ501264.1__QZA70128.1__274BB002_59__00058__D5-186
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qozB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.85 | 74.0 | 7.11e-01 | 89.1% | 82.9% |
| 7wrnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.84 | 71.0 | 7.23e-01 | 87.1% | 94.4% |
| 2xriA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.84 | 74.0 | 7.34e-01 | 90.0% | 90.7% |
| 5dk5A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.83 | 72.0 | 7.29e-01 | 89.6% | 97.0% |
| 7t2sA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.81 | 66.0 | 7.09e-01 | 87.6% | 96.0% |
| 2qxfA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 67.0 | 6.84e-01 | 88.1% | 98.4% |
| 2f96A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 68.0 | 6.85e-01 | 90.5% | 95.0% |
| 6vddD01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 50.0 | 5.23e-01 | 88.1% | 75.3% |
| 4qclA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.72 | 61.0 | 5.49e-01 | 88.6% | 82.3% |
| 1huxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 38.0 | 4.81e-01 | 87.6% | 99.2% |
| 3psfA04 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.63 | 44.0 | 4.86e-01 | 88.6% | 86.6% |
| 2ap1A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.57 | 39.0 | 4.56e-01 | 87.6% | 99.3% |
| 2e2oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 36.0 | 4.33e-01 | 88.1% | 96.9% |
| 2hoeA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 40.0 | 4.53e-01 | 88.6% | 96.0% |
| 3vglA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 37.0 | 4.37e-01 | 85.1% | 96.4% |
| 2qm1B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 4.34e-01 | 87.1% | 95.4% |
| 4h59A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 35.0 | 3.78e-01 | 91.0% | 78.9% |
| 3aonB00 | 3.40.50.10580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ATPase, V1 complex, subunit F | 0.53 | 23.0 | 3.14e-01 | 71.6% | 78.0% |
| 3a9uA02 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 29.0 | 3.35e-01 | 73.1% | 72.1% |
| 2j6pA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.52 | 35.0 | 4.00e-01 | 92.5% | 91.7% |
| 3htvA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 4.21e-01 | 92.0% | 91.7% |
| 3mfqA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 33.0 | 3.84e-01 | 89.6% | 91.1% |
| 1yvuA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 42.0 | 4.15e-01 | 86.1% | 99.1% |
| 4kreA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 41.0 | 3.83e-01 | 85.6% | 86.8% |
| 1c3kA00 | 2.100.10.30 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Jacalin-like lectin domain | 0.50 | 23.0 | 2.72e-01 | 71.1% | 58.0% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3738098 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.86 | 74.0 | 7.11e-01 | 88.6% | 91.1% |
| 3378450 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.86 | 74.0 | 7.04e-01 | 88.6% | 79.1% |
| 3707510 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.86 | 67.0 | 7.11e-01 | 81.6% | 89.4% |
| 3993235 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.84 | 74.0 | 7.22e-01 | 91.0% | 90.2% |
| 3942728 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.83 | 71.0 | 7.05e-01 | 93.0% | 85.2% |
| 4102293 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.82 | 69.0 | 7.15e-01 | 92.0% | 92.6% |
| 4044377 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 69.0 | 5.09e-01 | 88.1% | 40.9% |
| 3941572 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.81 | 68.0 | 5.67e-01 | 88.1% | 58.4% |
| 1501363 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 68.0 | 5.00e-01 | 88.1% | 40.7% |
| 4381276 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.79 | 69.0 | 6.62e-01 | 90.5% | 85.3% |
| 4044396 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.78 | 68.0 | 6.82e-01 | 90.5% | 93.2% |
| 3689537 | 2484.1.1.90 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDDh_C | 0.75 | 68.0 | 6.79e-01 | 94.5% | 99.5% |
| 3627091 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.75 | 68.0 | 6.40e-01 | 96.0% | 94.2% |
| 3211514 | 2484.1.1.65 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Maelstrom | 0.74 | 67.0 | 6.02e-01 | 95.5% | 93.3% |
| 4399667 | 2484.1.1.65 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Maelstrom | 0.74 | 68.0 | 6.16e-01 | 97.5% | 87.9% |
| 3181213 | 2484.1.1.90 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDDh_C | 0.74 | 70.0 | 6.43e-01 | 100.0% | 82.7% |
| 3624820 | 2484.1.1.65 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Maelstrom | 0.71 | 65.0 | 5.52e-01 | 95.5% | 79.4% |
| 4958553 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.71 | 60.0 | 5.81e-01 | 87.6% | 99.1% |
| 3719024 | 2484.1.1.177 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF2779 | 0.70 | 63.0 | 5.87e-01 | 92.5% | 94.1% |
| 3799955 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.70 | 65.0 | 5.83e-01 | 97.5% | 94.0% |
| 3271756 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 44.0 | 4.76e-01 | 91.0% | 80.0% |
| 4652181 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.61 | 43.0 | 4.78e-01 | 90.0% | 90.0% |
| 3366565 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.59 | 33.0 | 4.42e-01 | 81.6% | 100.0% |
| 3401772 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.57 | 48.0 | 4.85e-01 | 96.5% | 88.5% |
| 4529580 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.57 | 43.0 | 4.80e-01 | 88.1% | 98.8% |
| 5080207 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 44.0 | 4.45e-01 | 87.6% | 79.5% |
| 3939717 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.57 | 48.0 | 4.93e-01 | 95.0% | 93.7% |
| 3243863 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.57 | 48.0 | 4.82e-01 | 95.0% | 89.0% |
| 5030386 | 2484.1.1.10 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD | 0.56 | 38.0 | 4.18e-01 | 88.1% | 83.0% |
| 4673301 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.56 | 46.0 | 4.74e-01 | 93.5% | 89.7% |
| 3511625 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.56 | 48.0 | 4.90e-01 | 93.0% | 92.5% |
| 4579227 | 2484.1.1.72 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › YqgF | 0.53 | 46.0 | 4.54e-01 | 91.5% | 92.4% |
| 4130494 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.53 | 39.0 | 4.24e-01 | 87.6% | 92.1% |
| 3291187 | 2484.1.1.8 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › ROK | 0.52 | 38.0 | 4.09e-01 | 75.1% | 100.0% |
| 4945830 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.52 | 39.0 | 4.29e-01 | 87.1% | 96.9% |
| 4381671 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.52 | 39.0 | 4.28e-01 | 85.6% | 94.5% |
| 4423027 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.52 | 38.0 | 4.02e-01 | 87.1% | 82.2% |
| 3337523 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.52 | 40.0 | 4.42e-01 | 92.5% | 100.0% |
| 11164 | 2484.1.1.26 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi | 0.51 | 42.0 | 4.16e-01 | 86.6% | 98.6% |
| 4067863 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.51 | 39.0 | 4.20e-01 | 87.1% | 92.9% |
| 5075712 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.51 | 38.0 | 4.08e-01 | 86.6% | 89.7% |
D2
medium
residues 245-301