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NODE_12_length_310542_cov_175.846709.1__X__X__00171

Bact-Vir

NODE_12_length_310542_cov_175.846709.1__X__X__00171

Identity

Kingdom:
phage

Quality

92.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-82
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.89 55.0 6.86e-01 70.9% 100.0%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 57.0 6.39e-01 86.1% 91.9%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 54.0 5.70e-01 100.0% 81.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 53.0 5.72e-01 96.2% 86.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.76 63.0 6.41e-01 96.2% 90.9%
4dovA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.75 68.0 5.39e-01 100.0% 88.5%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 61.0 5.99e-01 98.7% 81.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 51.0 5.34e-01 70.9% 85.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 54.0 5.98e-01 98.7% 98.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 51.0 5.80e-01 96.2% 96.6%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 54.0 5.76e-01 92.4% 89.7%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 51.0 5.76e-01 88.6% 98.3%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 54.0 5.44e-01 79.7% 98.8%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 55.0 6.04e-01 93.7% 98.5%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.57e-01 96.2% 100.0%
1jheA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.70 50.0 4.31e-01 74.7% 47.6%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 56.0 5.51e-01 96.2% 83.1%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 50.0 5.60e-01 81.0% 98.4%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.67 47.0 4.91e-01 89.9% 78.1%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 50.0 5.32e-01 81.0% 95.7%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 5.81e-01 94.9% 100.0%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.64 50.0 4.46e-01 84.8% 59.6%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.64 58.0 5.32e-01 98.7% 78.4%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.63 48.0 4.18e-01 82.3% 73.4%
4ewcA01 2.20.25.560 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 31.0 3.61e-01 86.1% 67.9%
2zylA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.59 42.0 3.55e-01 100.0% 44.4%
7q04F01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.59 44.0 3.94e-01 100.0% 57.8%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 48.0 4.61e-01 98.7% 78.3%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 49.0 3.91e-01 92.4% 81.5%
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 35.0 3.32e-01 93.7% 51.1%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 46.0 3.02e-01 84.8% 48.5%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 44.0 4.46e-01 88.6% 84.6%
3oajA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 36.0 2.95e-01 98.7% 34.7%
3gkeA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.57 43.0 3.60e-01 100.0% 48.5%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.56 36.0 3.87e-01 100.0% 74.3%
7fjlA01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.56 42.0 3.50e-01 100.0% 46.0%
1k32A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.87e-01 84.8% 61.1%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 47.0 4.56e-01 100.0% 83.5%
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 46.0 4.27e-01 98.7% 72.8%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 37.0 2.74e-01 100.0% 25.8%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 43.0 2.99e-01 86.1% 46.8%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.55 40.0 3.89e-01 96.2% 69.2%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 42.0 2.74e-01 84.8% 44.7%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 32.0 3.04e-01 93.7% 51.1%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 43.0 3.37e-01 92.4% 87.6%
4ok4A02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 40.0 2.73e-01 92.4% 65.4%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3839016 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.86 64.0 6.99e-01 98.7% 93.8%
4432348 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.85 62.0 6.64e-01 98.7% 88.2%
4932434 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.84 57.0 6.01e-01 89.9% 78.6%
5056826 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.83 60.0 6.57e-01 81.0% 90.8%
5002601 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.82 59.0 6.71e-01 94.9% 100.0%
4432457 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.82 63.0 6.73e-01 98.7% 91.4%
5053906 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.82 58.0 6.59e-01 82.3% 96.7%
185635 4.1.1.391 beta barrels › SH3 › SH3 › SH3 › FDF, PF30873 0.82 58.0 4.92e-01 87.3% 47.9%
5000741 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.81 62.0 6.71e-01 96.2% 96.9%
4540843 4.1.1.434 beta barrels › SH3 › SH3 › SH3 › DUF2642 0.81 60.0 6.56e-01 98.7% 93.8%
3737903 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.81 55.0 6.38e-01 92.4% 100.0%
3290899 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.81 63.0 6.71e-01 98.7% 92.9%
858452 4.1.1.476 beta barrels › SH3 › SH3 › SH3 › PF30873 0.80 57.0 5.29e-01 93.7% 60.4%
4302391 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.80 63.0 7.00e-01 93.7% 100.0%
4157193 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 63.0 6.68e-01 98.7% 92.9%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 61.0 6.75e-01 98.7% 98.4%
4226849 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 62.0 6.21e-01 98.7% 80.0%
5050320 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.80 63.0 6.49e-01 97.5% 88.0%
3486496 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 54.0 6.28e-01 94.9% 100.0%
4514731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 58.0 5.65e-01 98.7% 70.6%
4044896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 58.0 5.99e-01 98.7% 81.3%
3492557 4.1.1.219 beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.79 63.0 5.74e-01 98.7% 66.0%
3673317 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 53.0 6.21e-01 93.7% 100.0%
3987498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 63.0 6.17e-01 98.7% 78.8%
3421158 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 54.0 6.06e-01 91.1% 93.3%
4422251 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.78 49.0 5.88e-01 91.1% 100.0%
3368254 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.78 53.0 6.16e-01 84.8% 100.0%
3784334 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.78 54.0 6.11e-01 75.9% 95.0%
4158712 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.78 60.0 6.39e-01 97.5% 91.4%
4554867 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 60.0 6.56e-01 97.5% 98.5%
4971470 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.77 61.0 6.26e-01 96.2% 88.0%
3866038 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.77 52.0 5.09e-01 96.2% 64.7%
4400642 4.1.1.257 beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.77 57.0 5.62e-01 97.5% 72.9%
5028741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 52.0 6.02e-01 79.7% 100.0%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.77 64.0 6.59e-01 96.2% 93.3%
4277213 4.1.1.431 beta barrels › SH3 › SH3 › SH3 › PF27152 0.76 55.0 5.78e-01 97.5% 84.3%
1031172 4.1.1.113 beta barrels › SH3 › SH3 › SH3 › TraI_2B 0.76 58.0 6.05e-01 98.7% 87.5%
3922679 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.76 47.0 5.73e-01 79.7% 100.0%
3420348 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.75 50.0 5.87e-01 70.9% 100.0%
4075769 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.75 50.0 5.84e-01 96.2% 100.0%
4083915 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.75 61.0 6.29e-01 98.7% 90.7%
4252954 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.74 60.0 6.31e-01 100.0% 95.7%
3419491 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 54.0 6.04e-01 96.2% 100.0%
3706786 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 53.0 5.43e-01 96.2% 78.7%
3475240 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.74 50.0 5.82e-01 77.2% 100.0%
3372243 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.87e-01 100.0% 85.0%
3818428 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.73 56.0 5.74e-01 100.0% 85.3%
3485965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 51.0 5.67e-01 97.5% 95.0%
3476178 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 57.0 4.92e-01 83.5% 87.5%
4998329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 47.0 5.44e-01 92.4% 96.4%
3850775 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.72 52.0 5.71e-01 89.9% 92.3%
3342430 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.59e-01 79.7% 84.0%
3612184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 50.0 5.63e-01 96.2% 96.7%
1527468 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 61.0 5.42e-01 92.4% 73.9%
3315100 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 51.0 5.54e-01 74.7% 100.0%
3558188 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.72 53.0 5.50e-01 97.5% 82.7%
3817476 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.72 45.0 5.36e-01 84.8% 100.0%
145285 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.72 55.0 5.96e-01 81.0% 97.0%
4998870 4.1.1.483 beta barrels › SH3 › SH3 › SH3 › RRXRR 0.71 47.0 4.66e-01 86.1% 63.5%
5025364 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 59.0 6.05e-01 98.7% 93.3%
3764432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 47.0 5.13e-01 97.5% 83.1%
3299797 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.71 45.0 5.05e-01 88.6% 85.0%
5017161 4.1.1.182 beta barrels › SH3 › SH3 › SH3 › DUF2097 0.71 60.0 5.89e-01 100.0% 84.7%
3824346 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.40e-01 100.0% 80.0%
3423337 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.71 54.0 5.39e-01 100.0% 80.0%
3901117 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.69 47.0 3.61e-01 100.0% 31.1%
3828348 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.73e-01 81.0% 100.0%
3533770 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.69 55.0 4.99e-01 100.0% 64.8%
3936885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.47e-01 93.7% 93.8%
3475462 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.68 53.0 5.21e-01 82.3% 76.5%
3998022 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 42.0 4.81e-01 70.9% 89.1%
3313119 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 51.0 5.16e-01 81.0% 83.7%
3340900 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 51.0 5.54e-01 98.7% 98.5%
3300051 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.67 48.0 4.95e-01 97.5% 80.0%
5062120 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 61.0 5.45e-01 98.7% 82.9%
3775592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 45.0 2.41e-01 70.9% 4.0%
3259547 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 58.0 5.11e-01 100.0% 83.5%
5002088 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.21e-01 97.5% 90.0%
3645373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 51.0 4.25e-01 100.0% 51.9%
3833030 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.62 56.0 4.64e-01 100.0% 81.5%
3584571 4.1.1.56 beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.58 51.0 3.61e-01 98.7% 32.8%