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NODE_12_length_310542_cov_175.846709.1__X__X__00182
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00182
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 41-117
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 52.0 | 5.28e-01 | 94.8% | 87.0% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 43.0 | 3.06e-01 | 74.0% | 36.3% |
| 2as9B01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 43.0 | 3.98e-01 | 92.2% | 57.4% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.61 | 44.0 | 3.60e-01 | 90.9% | 41.5% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 46.0 | 4.04e-01 | 89.6% | 55.8% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 47.0 | 3.78e-01 | 90.9% | 45.5% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 43.0 | 4.61e-01 | 94.8% | 98.4% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.59 | 48.0 | 3.62e-01 | 94.8% | 35.7% |
| 1upqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 44.0 | 3.99e-01 | 81.8% | 82.2% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 44.0 | 3.81e-01 | 79.2% | 79.3% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 42.0 | 3.63e-01 | 76.6% | 52.9% |
| 1fuiA03 | 3.20.14.10 | Alpha Beta › Alpha-Beta Barrel › L-fucose Isomerase; Chain A, domain 3 › L-fucose/L-arabinose isomerase, C-terminal | 0.58 | 49.0 | 3.43e-01 | 94.8% | 72.9% |
| 2p0hA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 44.0 | 3.88e-01 | 84.4% | 83.1% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 48.0 | 3.93e-01 | 92.2% | 79.6% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 48.0 | 3.91e-01 | 93.5% | 98.6% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 47.0 | 4.87e-01 | 97.4% | 100.0% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 42.0 | 3.51e-01 | 79.2% | 91.1% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 48.0 | 4.66e-01 | 100.0% | 98.9% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.28e-01 | 79.2% | 89.2% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 44.0 | 4.63e-01 | 85.7% | 100.0% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.55 | 47.0 | 4.48e-01 | 94.8% | 82.8% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 44.0 | 3.62e-01 | 85.7% | 82.9% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 41.0 | 3.82e-01 | 98.7% | 61.0% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.55 | 47.0 | 3.92e-01 | 96.1% | 61.6% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 44.0 | 3.58e-01 | 94.8% | 45.0% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 4.01e-01 | 76.6% | 95.6% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 38.0 | 4.12e-01 | 76.6% | 93.8% |
| 2ipiA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.52 | 45.0 | 3.25e-01 | 100.0% | 49.8% |
| 3vpyA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.51 | 35.0 | 2.95e-01 | 71.4% | 85.5% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.51 | 43.0 | 3.81e-01 | 93.5% | 100.0% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.51 | 46.0 | 3.76e-01 | 98.7% | 70.5% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 32.0 | 2.81e-01 | 81.8% | 36.9% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 40.0 | 3.35e-01 | 87.0% | 91.2% |
| 4b9wA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 36.0 | 3.34e-01 | 79.2% | 87.0% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 41.0 | 3.70e-01 | 92.2% | 98.2% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 39.0 | 3.26e-01 | 85.7% | 98.6% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3804236 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 56.0 | 4.53e-01 | 85.7% | 62.1% |
| 4438762 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.66 | 42.0 | 4.06e-01 | 75.3% | 57.6% |
| 3705440 | 206.1.1.13 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Alpha_kinase | 0.66 | 52.0 | 3.52e-01 | 85.7% | 42.8% |
| 3713334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.64 | 47.0 | 5.25e-01 | 88.3% | 100.0% |
| 3679362 | 4.1.1.351 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 | 0.64 | 46.0 | 4.52e-01 | 76.6% | 100.0% |
| None | — | 0.63 | 49.0 | 4.04e-01 | 83.1% | 70.0% | |
| 4024274 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.62 | 52.0 | 4.75e-01 | 96.1% | 69.5% |
| 3445812 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 48.0 | 3.98e-01 | 84.4% | 64.3% |
| 3704395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 47.0 | 5.03e-01 | 89.6% | 96.9% |
| 3821287 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.61 | 53.0 | 4.36e-01 | 96.1% | 52.9% |
| 4400596 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.61 | 52.0 | 4.21e-01 | 97.4% | 47.5% |
| 3270570 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 46.0 | 4.08e-01 | 81.8% | 78.3% |
| 4209798 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.61 | 53.0 | 5.14e-01 | 97.4% | 95.3% |
| 4272564 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.61 | 53.0 | 4.76e-01 | 97.4% | 70.4% |
| 2978978 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 49.0 | 4.96e-01 | 89.6% | 90.7% |
| 3372155 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 47.0 | 4.03e-01 | 84.4% | 76.8% |
| 3482374 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 46.0 | 3.24e-01 | 85.7% | 34.2% |
| 3734667 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 47.0 | 3.65e-01 | 87.0% | 83.9% |
| 4607738 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.60 | 52.0 | 4.64e-01 | 97.4% | 90.9% |
| 4936914 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.60 | 50.0 | 4.53e-01 | 98.7% | 68.6% |
| 3575581 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.59 | 51.0 | 4.03e-01 | 97.4% | 62.4% |
| 4387099 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.59 | 52.0 | 5.16e-01 | 98.7% | 100.0% |
| 5025498 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.59 | 51.0 | 4.90e-01 | 98.7% | 94.4% |
| 4964141 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.59 | 52.0 | 4.96e-01 | 100.0% | 95.6% |
| 3234107 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.59 | 45.0 | 4.73e-01 | 90.9% | 92.9% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.58 | 50.0 | 4.46e-01 | 96.1% | 69.1% |
| 3413652 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.58 | 42.0 | 4.64e-01 | 87.0% | 96.7% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.57 | 46.0 | 4.73e-01 | 92.2% | 93.2% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 45.0 | 4.74e-01 | 92.2% | 95.7% |
| 3711631 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 43.0 | 3.57e-01 | 81.8% | 65.0% |
| 1503651 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.57 | 43.0 | 4.29e-01 | 96.1% | 78.8% |
| 5010832 | 4.15.1.2 ↗ | beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 | 0.56 | 48.0 | 4.65e-01 | 100.0% | 98.9% |
| 3636807 | 1.1.5.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_oxase_2 | 0.56 | 41.0 | 2.83e-01 | 77.9% | 84.2% |
| 3170723 | 220.1.1.95 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH | 0.56 | 42.0 | 3.74e-01 | 81.8% | 79.1% |
| 3638300 | 220.1.1.95 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › VID27_PH | 0.56 | 42.0 | 3.55e-01 | 83.1% | 67.1% |
| 55 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.56 | 48.0 | 3.51e-01 | 92.2% | 59.8% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.56 | 44.0 | 3.77e-01 | 85.7% | 53.6% |
| 3972550 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.56 | 45.0 | 4.23e-01 | 96.1% | 72.0% |
| 4099346 | 220.1.1.12 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 | 0.56 | 44.0 | 3.47e-01 | 88.3% | 65.5% |
| 3712451 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 3.86e-01 | 90.9% | 57.6% |
| 3714156 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 45.0 | 4.41e-01 | 92.2% | 84.7% |
| 1146571 | 5092.1.1.8 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › TAdV_Fibre-like_head | 0.55 | 47.0 | 3.92e-01 | 96.1% | 61.6% |
| 3702177 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.31e-01 | 97.4% | 96.0% |
| 5053266 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.54 | 45.0 | 3.61e-01 | 93.5% | 45.0% |
| 3848485 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.54 | 47.0 | 3.97e-01 | 100.0% | 75.6% |
| 3519971 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.54 | 41.0 | 3.24e-01 | 84.4% | 56.6% |
| 3213122 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.54 | 46.0 | 4.19e-01 | 96.1% | 85.7% |
| 3626415 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 45.0 | 4.12e-01 | 94.8% | 84.8% |
| 3242587 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.53 | 37.0 | 3.49e-01 | 74.0% | 58.9% |
| 4315975 | 243.3.1.68 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY, FTP | 0.53 | 43.0 | 3.34e-01 | 87.0% | 70.9% |
| 3390372 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.53 | 44.0 | 3.17e-01 | 93.5% | 33.3% |
| 3786814 | 5.1.2.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT | 0.53 | 43.0 | 2.69e-01 | 90.9% | 61.1% |
| 3924619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 46.0 | 3.99e-01 | 97.4% | 64.2% |
| 3925367 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 39.0 | 3.26e-01 | 81.8% | 62.7% |
| 3527512 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.53 | 40.0 | 3.37e-01 | 84.4% | 62.1% |
| 5080210 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.52 | 40.0 | 2.99e-01 | 85.7% | 85.9% |
| 7410 | 219.1.1.64 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › PMT_C3 | 0.52 | 46.0 | 3.45e-01 | 98.7% | 82.8% |
| 3342304 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 39.0 | 3.18e-01 | 81.8% | 61.3% |
| 3199036 | 63.1.1.4 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › PRKCSH_1 | 0.52 | 35.0 | 2.98e-01 | 71.4% | 67.4% |
| 3284021 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 46.0 | 4.09e-01 | 100.0% | 100.0% |
| 3637480 | 5.1.4.378 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF27702 | 0.52 | 40.0 | 2.58e-01 | 85.7% | 75.2% |
| 3172880 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 41.0 | 3.06e-01 | 90.9% | 52.6% |
| 3608562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 43.0 | 3.43e-01 | 94.8% | 65.4% |
| 3496352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 45.0 | 3.92e-01 | 100.0% | 100.0% |