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NODE_12_length_310542_cov_175.846709.1__X__X__00198
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00198
Identity
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-78_90-197_216-270
Domain cluster:
rep: js4906-26-2_S25_scaffold_55_prodigal-single.1__X__X__00300__D20-198
D2
medium
residues 288-346
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.83 | 59.0 | 5.07e-01 | 74.6% | 66.3% |
| 3ripA02 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.79 | 62.0 | 3.90e-01 | 84.7% | 19.0% |
| 2oceA01 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.76 | 55.0 | 4.45e-01 | 78.0% | 39.8% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.76 | 61.0 | 4.98e-01 | 86.4% | 52.4% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 56.0 | 4.45e-01 | 86.4% | 40.8% |
| 2riqA01 | 1.10.20.130 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.70 | 54.0 | 5.27e-01 | 83.1% | 86.4% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 48.0 | 3.57e-01 | 84.7% | 57.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951588 | 4163.1.2.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like | 0.80 | 73.0 | 5.57e-01 | 100.0% | 48.5% |
| 5073937 | 101.1.2.899 ↗ | alpha arrays › HTH › HTH › winged helix domain › Zn_Ribbon_1 | 0.77 | 69.0 | 5.49e-01 | 100.0% | 53.9% |
| 4929483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.76 | 67.0 | 5.25e-01 | 98.3% | 65.0% |