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NODE_12_length_310542_cov_175.846709.1__X__X__00207

Bact-Vir

NODE_12_length_310542_cov_175.846709.1__X__X__00207

Identity

Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-90
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ln0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.63 46.0 4.58e-01 77.5% 95.7%
1suuA00 2.120.10.90 Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal 0.54 37.0 2.58e-01 70.8% 41.3%
1n0eA00 3.40.1550.20 Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › Transcriptional regulator MraZ domain 0.53 44.0 3.88e-01 96.6% 77.3%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5077070 375.1.3.1 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › DUF1922 0.62 41.0 4.77e-01 71.9% 98.3%
3666940 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.61 44.0 4.03e-01 77.5% 59.2%
3365225 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.60 43.0 4.00e-01 77.5% 59.2%
3735748 821.1.1.3 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.56 41.0 3.43e-01 85.4% 41.8%
3663319 2492.1.1.2 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.52 31.0 2.43e-01 70.8% 26.7%
3672275 2004.1.1.250 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.50 42.0 2.89e-01 97.8% 41.4%