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NODE_12_length_310542_cov_175.846709.1__X__X__00223
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00223
Identity
- Kingdom:
- phage
Quality
92.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-78
Domain cluster:
rep: SRR1747065_scaffold_10_prodigal-single.1__X__X__00219__D68-137
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3renA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.73 | 53.0 | 3.35e-01 | 76.1% | 20.5% |
| 1t3dA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.67 | 49.0 | 3.95e-01 | 78.9% | 61.4% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.66 | 50.0 | 4.67e-01 | 80.3% | 96.5% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 47.0 | 4.20e-01 | 80.3% | 75.2% |
| 2jqtA00 | 1.20.1280.40 | Mainly Alpha › Up-down Bundle › Monooxygenase › HHA | 0.62 | 40.0 | 4.38e-01 | 83.1% | 82.5% |
| 3zxsC02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 53.0 | 4.15e-01 | 95.8% | 69.5% |
| 2aw6A02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.62 | 44.0 | 3.16e-01 | 77.5% | 24.9% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.61 | 44.0 | 3.73e-01 | 84.5% | 44.6% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.61 | 45.0 | 3.85e-01 | 78.9% | 76.7% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.59 | 48.0 | 4.64e-01 | 91.5% | 88.0% |
| 3dd9D02 | 6.10.140.2060 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 33.0 | 4.08e-01 | 80.3% | 95.1% |
| 4x5mA00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 48.0 | 4.59e-01 | 93.0% | 84.9% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.58 | 41.0 | 3.81e-01 | 78.9% | 85.9% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.57 | 35.0 | 3.60e-01 | 76.1% | 64.2% |
| 7y4rB01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 49.0 | 4.31e-01 | 100.0% | 68.9% |
| 1a59A02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.55 | 46.0 | 4.10e-01 | 97.2% | 70.4% |
| 6xy4A01 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.55 | 45.0 | 3.94e-01 | 100.0% | 60.2% |
| 1u8vA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.54 | 47.0 | 3.78e-01 | 100.0% | 62.9% |
| 3o8jA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.54 | 44.0 | 4.06e-01 | 95.8% | 71.7% |
| 6b8hO01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.53 | 44.0 | 4.07e-01 | 98.6% | 72.7% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.52 | 47.0 | 4.22e-01 | 95.8% | 80.9% |
| 2va8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.52 | 33.0 | 3.58e-01 | 88.7% | 82.1% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 36.0 | 3.25e-01 | 73.2% | 56.0% |
| 3v53E00 | 1.20.1390.10 | Mainly Alpha › Up-down Bundle › PWI domain › PWI domain | 0.50 | 37.0 | 3.36e-01 | 85.9% | 55.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3109778 | 109.2.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GlcNAc_2-epim | 0.69 | 53.0 | 3.27e-01 | 81.7% | 18.4% |
| 3228061 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.61 | 50.0 | 4.14e-01 | 91.5% | 94.5% |
| 3431415 | 6155.1.1.6 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › DUF2921 | 0.60 | 45.0 | 4.28e-01 | 81.7% | 75.3% |
| 3721181 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.59 | 50.0 | 3.57e-01 | 98.6% | 36.2% |
| 4150329 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.57 | 44.0 | 3.63e-01 | 93.0% | 43.4% |
| 5009682 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.56 | 42.0 | 3.60e-01 | 81.7% | 69.2% |
| 3971692 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.56 | 45.0 | 3.77e-01 | 100.0% | 50.4% |
| 4283355 | 563.1.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.54 | 43.0 | 4.09e-01 | 98.6% | 73.3% |
| 3817728 | 3860.1.1.257 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › Ovate | 0.54 | 40.0 | 3.70e-01 | 83.1% | 60.0% |
| 3897540 | 3919.1.1.3 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMMD8_HN | 0.52 | 42.0 | 3.88e-01 | 93.0% | 90.5% |