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NODE_12_length_310542_cov_175.846709.1__X__X__00228
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00228
Identity
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-152
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4p6qA02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 33.0 | 4.29e-01 | 93.2% | 97.4% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 34.0 | 4.31e-01 | 94.6% | 92.9% |
| 1kn6A00 | 3.30.70.850 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8, pro-domain | 0.61 | 31.0 | 4.13e-01 | 93.9% | 95.9% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.60 | 36.0 | 4.36e-01 | 89.9% | 91.7% |
| 4mt1A03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.60 | 38.0 | 4.62e-01 | 93.9% | 98.0% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.60 | 37.0 | 4.29e-01 | 95.9% | 88.2% |
| 1qm9A02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 33.0 | 3.95e-01 | 94.6% | 86.5% |
| 1u0sA00 | 3.30.70.1110 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Histidine kinase CheA-like, P2 response regulator-binding domain | 0.57 | 32.0 | 4.02e-01 | 93.9% | 93.0% |
| 4mt1A06 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.57 | 37.0 | 4.33e-01 | 93.9% | 96.0% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.56 | 24.0 | 2.96e-01 | 72.3% | 59.8% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.56 | 24.0 | 3.55e-01 | 89.9% | 98.2% |
| 4yjmC00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.56 | 31.0 | 3.87e-01 | 93.9% | 92.8% |
| 2f5gA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.56 | 36.0 | 3.79e-01 | 94.6% | 72.3% |
| 1lxnA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 31.0 | 3.62e-01 | 94.6% | 78.6% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 34.0 | 3.83e-01 | 93.9% | 82.0% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 35.0 | 4.11e-01 | 94.6% | 95.1% |
| 5xzqF00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 35.0 | 4.07e-01 | 94.6% | 94.2% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 34.0 | 4.04e-01 | 93.9% | 94.0% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.54 | 29.0 | 3.77e-01 | 95.9% | 100.0% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.91e-01 | 93.9% | 94.8% |
| 1iujA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 33.0 | 3.81e-01 | 95.3% | 90.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944656 | 304.128.1.1 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB › FtsX | 0.62 | 39.0 | 4.49e-01 | 95.3% | 87.6% |
| 3455834 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.61 | 33.0 | 4.09e-01 | 89.2% | 84.4% |
| 4042831 | 304.110.1.4 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › UPF0176_N | 0.60 | 32.0 | 3.81e-01 | 93.2% | 77.9% |
| 3731765 | 304.8.1.83 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF25904 | 0.59 | 36.0 | 4.43e-01 | 93.2% | 100.0% |
| 3727518 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 36.0 | 4.09e-01 | 93.9% | 88.2% |
| 4319825 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.55 | 34.0 | 3.74e-01 | 93.9% | 77.4% |
| 3271520 | 304.4.1.74 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › PF28943 | 0.54 | 34.0 | 4.09e-01 | 95.3% | 100.0% |
| 3970630 | 304.4.1.57 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › MFS_3 | 0.53 | 34.0 | 3.80e-01 | 95.3% | 83.6% |
| 5005164 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.53 | 32.0 | 3.66e-01 | 87.2% | 81.5% |
| 5160 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.52 | 33.0 | 3.81e-01 | 95.3% | 90.2% |
| 3380460 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 32.0 | 3.74e-01 | 91.2% | 86.7% |
| 3860616 | 3694.1.1.1 ↗ | alpha bundles › Tail specific protease helical domain › Tail specific protease helical domain › Tail specific protease helical domain › Peptidase_S41_N | 0.52 | 30.0 | 3.67e-01 | 83.8% | 92.2% |
| 3847629 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.51 | 30.0 | 3.16e-01 | 84.5% | 61.4% |
| 4236458 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.51 | 44.0 | 3.47e-01 | 95.9% | 51.2% |
| 3943514 | 304.4.1.15 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › NIPSNAP | 0.50 | 32.0 | 3.68e-01 | 95.3% | 89.5% |