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NODE_12_length_310542_cov_175.846709.1__X__X__00231
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00231
Identity
- Kingdom:
- phage
Quality
80.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-100
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hv0A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.67 | 38.0 | 3.60e-01 | 100.0% | 44.6% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.62 | 51.0 | 5.25e-01 | 100.0% | 92.0% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 49.0 | 5.01e-01 | 100.0% | 88.5% |
| 3mn2A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 39.0 | 3.67e-01 | 100.0% | 54.6% |
| 3bvxA02 | 1.20.1270.50 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain | 0.59 | 49.0 | 4.57e-01 | 100.0% | 72.1% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.58 | 38.0 | 3.50e-01 | 76.7% | 50.9% |
| 2rekA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 41.0 | 3.37e-01 | 74.4% | 47.1% |
| 1tjoB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 42.0 | 3.44e-01 | 77.8% | 74.9% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.57 | 46.0 | 4.68e-01 | 98.9% | 90.8% |
| 3nrxA00 | 1.20.58.1520 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 36.0 | 3.27e-01 | 84.4% | 48.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 41.0 | 3.55e-01 | 80.0% | 87.2% |
| 3t9jA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 40.0 | 3.46e-01 | 76.7% | 90.3% |
| 2yw6B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 41.0 | 3.51e-01 | 80.0% | 86.7% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.55 | 41.0 | 3.45e-01 | 80.0% | 81.1% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 35.0 | 3.34e-01 | 84.4% | 54.7% |
| 3p42A02 | 6.10.250.2280 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 32.0 | 3.60e-01 | 75.6% | 75.7% |
| 1kxpD02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.54 | 39.0 | 3.96e-01 | 76.7% | 77.3% |
| 1ci4A00 | 1.10.150.40 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF | 0.54 | 41.0 | 4.18e-01 | 85.6% | 85.2% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 33.0 | 3.55e-01 | 81.1% | 72.4% |
| 1gpjA03 | 1.10.1200.70 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain | 0.53 | 39.0 | 4.02e-01 | 76.7% | 88.2% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 34.0 | 3.37e-01 | 82.2% | 59.8% |
| 1hi8A02 | 1.10.490.60 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phage p2 RNA dependent RNA polymerase domain | 0.53 | 42.0 | 3.73e-01 | 91.1% | 79.9% |
| 3nxcA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 38.0 | 3.12e-01 | 76.7% | 52.0% |
| 2vzbB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 38.0 | 3.20e-01 | 80.0% | 74.3% |
| 4d0nB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.51 | 41.0 | 3.04e-01 | 90.0% | 40.4% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3743101 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.68 | 47.0 | 5.11e-01 | 100.0% | 86.7% |
| 4981740 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.67 | 44.0 | 4.94e-01 | 98.9% | 90.8% |
| 3189775 | 141.1.1.2 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › SQS_PSY | 0.66 | 37.0 | 2.47e-01 | 90.0% | 15.1% |
| 5036841 | 5052.1.1.0 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein | 0.61 | 48.0 | 3.38e-01 | 85.6% | 59.3% |
| 3979831 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 36.0 | 4.07e-01 | 100.0% | 80.0% |
| 3420180 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.60 | 50.0 | 4.29e-01 | 100.0% | 56.6% |
| 2122153 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.59 | 43.0 | 4.40e-01 | 100.0% | 79.1% |
| 3419649 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.59 | 46.0 | 4.27e-01 | 100.0% | 66.1% |
| 3242683 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.58 | 45.0 | 4.50e-01 | 98.9% | 83.3% |
| 4971843 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.57 | 37.0 | 3.72e-01 | 84.4% | 65.2% |
| 5079439 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.57 | 44.0 | 4.22e-01 | 100.0% | 71.4% |
| 3516461 | 603.1.1.103 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF29732 | 0.57 | 36.0 | 3.38e-01 | 84.4% | 50.9% |
| 3771990 | 3567.1.1.6 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › DGCR6 | 0.56 | 33.0 | 3.02e-01 | 85.6% | 41.6% |
| 3551714 | 592.6.1.2 ↗ | alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › PF26582 | 0.56 | 42.0 | 4.02e-01 | 78.9% | 67.6% |
| 5027732 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.56 | 32.0 | 3.64e-01 | 84.4% | 73.9% |
| 3630256 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.56 | 43.0 | 3.61e-01 | 100.0% | 49.3% |
| 3719985 | 601.14.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin | 0.55 | 39.0 | 3.79e-01 | 98.9% | 65.7% |
| 3743803 | 1075.1.1.20 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_CDR | 0.55 | 48.0 | 3.50e-01 | 100.0% | 45.8% |
| 5065764 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.54 | 45.0 | 4.31e-01 | 100.0% | 79.0% |
| 3926946 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.54 | 42.0 | 4.43e-01 | 84.4% | 98.8% |
| 3700266 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.54 | 49.0 | 3.88e-01 | 100.0% | 62.2% |
| 3633369 | 611.9.1.6 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Ran-binding | 0.54 | 48.0 | 4.02e-01 | 100.0% | 65.8% |
| 3255290 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.53 | 41.0 | 3.52e-01 | 100.0% | 51.7% |
| 4013477 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.52 | 47.0 | 4.40e-01 | 100.0% | 89.1% |
| 3879435 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.50 | 40.0 | 3.88e-01 | 94.4% | 78.1% |