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NODE_12_length_310542_cov_175.846709.1__X__X__00259
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00259
Identity
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-100
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 40.0 | 4.64e-01 | 100.0% | 79.0% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 37.0 | 4.27e-01 | 93.2% | 73.8% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.67 | 53.0 | 5.08e-01 | 86.4% | 93.3% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 37.0 | 4.30e-01 | 100.0% | 78.0% |
| 3zfnA02 | 2.30.140.40 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain | 0.66 | 34.0 | 4.05e-01 | 76.1% | 75.4% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 38.0 | 4.14e-01 | 100.0% | 70.4% |
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 52.0 | 4.54e-01 | 89.8% | 82.4% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.64 | 37.0 | 4.26e-01 | 100.0% | 83.1% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 37.0 | 4.05e-01 | 100.0% | 69.4% |
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.64 | 54.0 | 4.68e-01 | 93.2% | 87.5% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 44.0 | 4.90e-01 | 100.0% | 94.0% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 4.14e-01 | 100.0% | 71.1% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.97e-01 | 93.2% | 90.7% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.59 | 38.0 | 4.30e-01 | 100.0% | 90.5% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 48.0 | 4.21e-01 | 89.8% | 83.9% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 35.0 | 4.09e-01 | 96.6% | 84.1% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.59 | 37.0 | 2.98e-01 | 94.3% | 31.0% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 37.0 | 4.18e-01 | 93.2% | 83.6% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 47.0 | 4.48e-01 | 93.2% | 80.7% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 4.44e-01 | 89.8% | 88.9% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 4.35e-01 | 89.8% | 88.0% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.56 | 33.0 | 2.95e-01 | 96.6% | 40.5% |
| 1b3qB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 38.0 | 4.22e-01 | 97.7% | 92.6% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 33.0 | 3.38e-01 | 75.0% | 62.1% |
| 1tqzA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 45.0 | 4.07e-01 | 93.2% | 91.9% |
| 2ls0101 | 2.40.50.670 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme | 0.54 | 45.0 | 4.18e-01 | 95.5% | 93.9% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 45.0 | 4.04e-01 | 100.0% | 89.5% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 35.0 | 2.99e-01 | 84.1% | 39.5% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 41.0 | 3.43e-01 | 100.0% | 49.7% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 3.54e-01 | 96.6% | 77.5% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.52 | 44.0 | 4.02e-01 | 95.5% | 81.4% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 46.0 | 4.04e-01 | 100.0% | 91.6% |
| 1yuaA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.51 | 31.0 | 3.62e-01 | 76.1% | 91.4% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 39.0 | 3.92e-01 | 97.7% | 82.4% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 33.0 | 2.31e-01 | 95.5% | 19.8% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 46.0 | 5.27e-01 | 100.0% | 75.4% |
| 4014812 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.75 | 39.0 | 4.60e-01 | 94.3% | 73.3% |
| 3703749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 40.0 | 4.54e-01 | 100.0% | 72.3% |
| 2464247 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.70 | 39.0 | 4.39e-01 | 96.6% | 71.2% |
| 3941152 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.69 | 39.0 | 4.43e-01 | 81.8% | 75.4% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 40.0 | 4.36e-01 | 100.0% | 71.4% |
| 4982354 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.67 | 41.0 | 4.61e-01 | 100.0% | 81.5% |
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 39.0 | 4.38e-01 | 100.0% | 76.9% |
| 3750640 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.66 | 50.0 | 4.70e-01 | 81.8% | 85.5% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.66 | 38.0 | 3.70e-01 | 100.0% | 50.0% |
| 3930846 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.66 | 37.0 | 4.14e-01 | 80.7% | 70.0% |
| 4888987 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.66 | 38.0 | 4.21e-01 | 100.0% | 72.5% |
| 3698762 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.65 | 38.0 | 3.59e-01 | 100.0% | 48.5% |
| 3597255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 38.0 | 3.85e-01 | 100.0% | 58.8% |
| 2675820 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.64 | 37.0 | 3.73e-01 | 100.0% | 54.9% |
| 4376886 | 4.1.1.241 ↗ | beta barrels › SH3 › SH3 › SH3 › NifZ | 0.64 | 44.0 | 4.66e-01 | 100.0% | 80.0% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.64 | 37.0 | 4.19e-01 | 100.0% | 78.1% |
| 3741680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 36.0 | 4.33e-01 | 100.0% | 89.1% |
| 3591224 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 36.0 | 4.35e-01 | 100.0% | 96.0% |
| 1821014 | 4.1.1.70 ↗ | beta barrels › SH3 › SH3 › SH3 › Tsr0524-like | 0.63 | 41.0 | 4.63e-01 | 100.0% | 92.2% |
| 2712015 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.63 | 51.0 | 5.28e-01 | 92.0% | 95.1% |
| 3701345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 45.0 | 4.72e-01 | 98.9% | 83.7% |
| 3396897 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.62 | 39.0 | 4.49e-01 | 100.0% | 88.9% |
| 3890418 | 220.1.1.38 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N | 0.62 | 51.0 | 4.83e-01 | 90.9% | 94.3% |
| 3952939 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.61 | 44.0 | 4.67e-01 | 76.1% | 93.3% |
| 5082246 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 29.0 | 3.42e-01 | 94.3% | 61.7% |
| 3194005 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.61 | 39.0 | 4.24e-01 | 100.0% | 77.3% |
| 3624046 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 48.0 | 4.35e-01 | 90.9% | 82.5% |
| 3627778 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.58 | 48.0 | 4.66e-01 | 93.2% | 87.0% |
| 3700747 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 4.71e-01 | 100.0% | 86.7% |
| 3469923 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 44.0 | 4.35e-01 | 84.1% | 93.7% |
| 3690811 | 220.1.1.67 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 | 0.58 | 44.0 | 4.24e-01 | 83.0% | 91.0% |
| 3953251 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.57 | 51.0 | 4.34e-01 | 100.0% | 90.3% |
| 4001239 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 4.15e-01 | 80.7% | 78.9% |
| 3598206 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 47.0 | 4.43e-01 | 94.3% | 81.8% |
| 1168794 | 330.1.1.8 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dsRBD | 0.56 | 37.0 | 3.63e-01 | 92.0% | 62.1% |
| 3810543 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.56 | 45.0 | 4.27e-01 | 89.8% | 78.2% |
| 4888509 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.56 | 47.0 | 3.59e-01 | 96.6% | 81.7% |
| 4261760 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.55 | 40.0 | 3.98e-01 | 100.0% | 72.6% |
| 4013660 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.55 | 48.0 | 3.13e-01 | 97.7% | 24.0% |
| 3702466 | 220.1.1.80 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RME-8_N | 0.55 | 44.0 | 4.06e-01 | 90.9% | 76.7% |
| 3277727 | 4.8.1.43 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP | 0.54 | 45.0 | 4.40e-01 | 96.6% | 84.2% |
| 3622600 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.54 | 38.0 | 3.36e-01 | 88.6% | 51.2% |
| 3685243 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 45.0 | 3.26e-01 | 96.6% | 71.1% |
| 4488006 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.53 | 44.0 | 3.02e-01 | 89.8% | 44.7% |
| 3597563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 45.0 | 4.01e-01 | 94.3% | 71.2% |
| 3692299 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.52 | 44.0 | 2.91e-01 | 97.7% | 87.9% |
| 3621257 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.51 | 33.0 | 3.57e-01 | 80.7% | 77.3% |
| 4544191 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.51 | 29.0 | 3.49e-01 | 75.0% | 89.1% |
| 4122119 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.51 | 28.0 | 2.76e-01 | 100.0% | 48.4% |
| 1411292 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.50 | 38.0 | 3.40e-01 | 80.7% | 86.3% |