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NODE_12_length_310542_cov_175.846709.1__X__X__00278
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00278
Identity
- Kingdom:
- phage
Quality
89.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-60
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r4kB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 42.0 | 4.05e-01 | 75.5% | 96.8% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 3.70e-01 | 77.4% | 81.2% |
| 2i8eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 37.0 | 3.36e-01 | 98.1% | 45.9% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 47.0 | 3.89e-01 | 92.5% | 89.8% |
| 3dkwG02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 3.57e-01 | 75.5% | 90.1% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 39.0 | 2.58e-01 | 73.6% | 96.9% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.56 | 43.0 | 3.30e-01 | 86.8% | 85.3% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.55 | 43.0 | 3.30e-01 | 83.0% | 54.8% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.55 | 44.0 | 4.12e-01 | 92.5% | 88.2% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 3.68e-01 | 73.6% | 95.1% |
| 3id7A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.54 | 42.0 | 2.61e-01 | 92.5% | 20.7% |
| 4xpkA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 38.0 | 2.91e-01 | 79.2% | 68.1% |
| 3j7aY00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 45.0 | 3.25e-01 | 94.3% | 90.9% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 4.04e-01 | 92.5% | 92.1% |
| 3hmzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.03e-01 | 98.1% | 50.3% |
| 4yzgA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.52 | 43.0 | 2.79e-01 | 100.0% | 92.5% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.52 | 42.0 | 3.88e-01 | 90.6% | 88.6% |
| 1wy9A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.52 | 35.0 | 2.92e-01 | 73.6% | 74.8% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.78e-01 | 92.5% | 89.2% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.51 | 41.0 | 3.70e-01 | 100.0% | 76.5% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.79e-01 | 92.5% | 82.7% |
| 3lapA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.62e-01 | 86.8% | 83.8% |
| 3zcoA00 | 1.10.10.2450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 43.0 | 3.34e-01 | 100.0% | 88.2% |
| 3o2pE00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 41.0 | 3.56e-01 | 92.5% | 74.4% |
| 3eo4D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 3.02e-01 | 100.0% | 43.2% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2100896 | 1180.1.1.1 ↗ | alpha bundles › Flagellar biosynthetic protein FliP periplasmic domain › Flagellar biosynthetic protein FliP periplasmic domain › Flagellar biosynthetic protein FliP periplasmic domain › FliP | 0.68 | 46.0 | 4.35e-01 | 71.7% | 77.6% |
| 3629836 | 109.20.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › Coatomer subunit alpha C-terminal domain › Coatomer subunit alpha C-terminal domain › COPI_C, TPR_COPA_B | 0.63 | 45.0 | 2.65e-01 | 77.4% | 32.7% |
| 3728309 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.30e-01 | 100.0% | 61.4% |
| 4940770 | 109.2.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › GDE_C | 0.61 | 46.0 | 2.79e-01 | 83.0% | 54.5% |
| 3548818 | 5001.1.1.111 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1, 7TM_GPCR_Srw | 0.59 | 48.0 | 3.03e-01 | 92.5% | 59.4% |
| 4468068 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.59 | 43.0 | 3.54e-01 | 79.2% | 69.0% |
| 5065253 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.58 | 44.0 | 4.03e-01 | 90.6% | 67.5% |
| 4961224 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.58 | 44.0 | 4.08e-01 | 86.8% | 74.3% |
| 3877553 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.57 | 46.0 | 3.80e-01 | 92.5% | 74.0% |
| 3939572 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.57 | 46.0 | 3.08e-01 | 92.5% | 62.7% |
| 4012859 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 3.37e-01 | 79.2% | 76.2% |
| 3922802 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.56 | 44.0 | 3.48e-01 | 92.5% | 64.2% |
| 3533128 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.54 | 42.0 | 3.48e-01 | 92.5% | 66.4% |
| 3223453 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.53 | 42.0 | 3.48e-01 | 92.5% | 68.6% |
| 3867816 | 101.1.2.506 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 | 0.53 | 41.0 | 3.41e-01 | 92.5% | 69.1% |
| 5008977 | 108.1.1.234 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › KdpC | 0.52 | 39.0 | 2.69e-01 | 81.1% | 60.0% |
| 4568416 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.57e-01 | 90.6% | 61.1% |
| 5032077 | 102.1.1.166 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF27218 | 0.52 | 41.0 | 3.74e-01 | 100.0% | 96.5% |
| 3883278 | 101.1.2.34 ↗ | alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding | 0.52 | 40.0 | 3.39e-01 | 88.7% | 67.4% |
| 4927156 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.29e-01 | 86.8% | 50.0% |
| 4999932 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.51e-01 | 92.5% | 65.6% |
| 4005246 | 101.1.2.60 ↗ | alpha arrays › HTH › HTH › winged helix domain › HA2_N | 0.50 | 41.0 | 3.85e-01 | 92.5% | 83.1% |