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NODE_12_length_310542_cov_175.846709.1__X__X__00289
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00289
Identity
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-106
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c2uA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 29.0 | 3.27e-01 | 76.9% | 60.5% |
| 3c12A01 | 2.30.30.910 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 24.0 | 3.24e-01 | 84.6% | 76.5% |
| 4l9mA03 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 35.0 | 4.06e-01 | 71.2% | 90.8% |
| 1br2A03 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.54 | 32.0 | 3.39e-01 | 72.1% | 64.2% |
| 3tgxB00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.53 | 36.0 | 3.54e-01 | 71.2% | 96.5% |
| 1hqvA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 36.0 | 3.03e-01 | 73.1% | 84.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042484 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 39.0 | 3.47e-01 | 73.1% | 48.3% |
| 1544850 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.55 | 45.0 | 3.89e-01 | 88.5% | 95.2% |
| 3286915 | 620.1.1.1 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DUF664 | 0.54 | 45.0 | 3.99e-01 | 93.3% | 87.5% |
| 3589056 | 2003.1.2.56 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_9 | 0.53 | 42.0 | 2.78e-01 | 85.6% | 96.9% |
| 3732541 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.50 | 35.0 | 3.77e-01 | 72.1% | 93.3% |
| None | — | 0.50 | 45.0 | 3.06e-01 | 100.0% | 87.2% | |
| None | — | 0.50 | 44.0 | 3.13e-01 | 98.1% | 93.9% | |
| None | — | 0.50 | 45.0 | 3.07e-01 | 100.0% | 87.5% | |
| 4031001 | 2003.1.3.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_3 | 0.50 | 45.0 | 3.11e-01 | 100.0% | 83.6% |
D2
high
residues 120-189