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NODE_12_length_310542_cov_175.846709.1__X__X__00302
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00302
Identity
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-55
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hf1A01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.70 | 56.0 | 5.22e-01 | 88.6% | 70.9% |
| 5w5yB08 | 3.90.1800.10 | Alpha Beta › Alpha-Beta Complex › DCoH-like › RNA polymerase alpha subunit dimerisation domain | 0.66 | 54.0 | 3.84e-01 | 95.5% | 47.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059258 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.90 | 74.0 | 4.59e-01 | 100.0% | 17.7% |
| 3366631 | 60.1.2.4 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › PF29334 | 0.70 | 53.0 | 3.38e-01 | 93.2% | 17.2% |
| 3669849 | 60.1.2.4 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › PF29334 | 0.68 | 57.0 | 3.46e-01 | 97.7% | 14.9% |
| 3716858 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 55.0 | 5.54e-01 | 90.9% | 95.6% |
| 3832353 | 375.1.1.184 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TOP3B | 0.67 | 59.0 | 3.87e-01 | 100.0% | 28.9% |
| 5081496 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 50.0 | 5.13e-01 | 84.1% | 92.5% |
| 3578444 | 375.1.1.184 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TOP3B | 0.66 | 57.0 | 4.74e-01 | 100.0% | 71.2% |
| 3509582 | 375.1.1.184 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TOP3B | 0.66 | 57.0 | 3.77e-01 | 100.0% | 30.3% |
| 5046730 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.65 | 52.0 | 3.77e-01 | 93.2% | 37.0% |
| 4969991 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.64 | 48.0 | 4.82e-01 | 97.7% | 82.2% |
| 4583465 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.64 | 51.0 | 5.04e-01 | 100.0% | 86.0% |
| 4974669 | 4.1.1.458 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2098 | 0.64 | 52.0 | 4.29e-01 | 100.0% | 51.1% |
| 4169657 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 49.0 | 4.82e-01 | 100.0% | 86.0% |
| 4031064 | 4999.1.1.0 ↗ | beta barrels › YopX, C-terminal domain-like › YopX, C-terminal domain-like › YopX, C-terminal domain-like | 0.60 | 45.0 | 4.32e-01 | 97.7% | 72.7% |
| 3967325 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.59 | 43.0 | 3.19e-01 | 88.6% | 88.0% |
| 5071104 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 45.0 | 4.69e-01 | 93.2% | 100.0% |
| 3177365 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.58 | 45.0 | 4.28e-01 | 100.0% | 88.3% |
| 4595968 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 46.0 | 4.18e-01 | 100.0% | 72.3% |
| 3256523 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.56 | 45.0 | 3.97e-01 | 100.0% | 66.7% |
| 3532763 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.56 | 46.0 | 4.38e-01 | 100.0% | 85.5% |
| 3828095 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 44.0 | 3.96e-01 | 100.0% | 68.6% |
| 3665215 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.55 | 44.0 | 4.26e-01 | 100.0% | 85.5% |
| 3266881 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.55 | 45.0 | 3.77e-01 | 100.0% | 64.7% |
| 3788673 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.54 | 43.0 | 3.68e-01 | 100.0% | 55.3% |
| 3571832 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.53 | 43.0 | 4.12e-01 | 100.0% | 85.5% |
| 3872106 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 43.0 | 4.11e-01 | 100.0% | 85.5% |
| 3853716 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 42.0 | 3.17e-01 | 100.0% | 35.6% |
| 3335631 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.52 | 40.0 | 3.96e-01 | 97.7% | 92.0% |