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NODE_12_length_310542_cov_175.846709.1__X__X__00306
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00306
Identity
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-110
Domain cluster:
rep: MN234211.1__QFG12772.1__PBI_MIMI_92__00092__D4-63
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 52.0 | 5.55e-01 | 84.7% | 77.4% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 53.0 | 5.71e-01 | 84.7% | 82.3% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 46.0 | 5.06e-01 | 83.3% | 78.0% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.73 | 43.0 | 4.61e-01 | 84.7% | 68.9% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.72 | 52.0 | 5.56e-01 | 84.7% | 87.3% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 47.0 | 4.73e-01 | 84.7% | 67.6% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 46.0 | 4.64e-01 | 84.7% | 66.7% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 35.0 | 4.18e-01 | 81.9% | 71.4% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 43.0 | 4.43e-01 | 80.6% | 68.7% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 43.0 | 4.22e-01 | 73.6% | 61.5% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 43.0 | 4.41e-01 | 84.7% | 71.4% |
| 5wb2B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 40.0 | 4.00e-01 | 75.0% | 63.0% |
| 1zxtA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 40.0 | 4.28e-01 | 77.8% | 77.0% |
| 2kssA01 | 2.30.30.630 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 5.17e-01 | 84.7% | 96.8% |
| 1nr4C00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 39.0 | 4.07e-01 | 75.0% | 69.7% |
| 2dk3A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 45.0 | 4.27e-01 | 84.7% | 65.1% |
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 39.0 | 4.10e-01 | 75.0% | 70.1% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 48.0 | 4.96e-01 | 84.7% | 97.0% |
| 1eigA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 40.0 | 3.98e-01 | 75.0% | 65.8% |
| 1eotA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 39.0 | 3.92e-01 | 75.0% | 64.9% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 39.0 | 4.10e-01 | 75.0% | 74.2% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 43.0 | 4.48e-01 | 84.7% | 90.6% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 38.0 | 3.43e-01 | 73.6% | 48.1% |
| 2kjzA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.57 | 31.0 | 3.44e-01 | 77.8% | 64.9% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 42.0 | 3.63e-01 | 79.2% | 77.5% |
| 5cbeE00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 36.0 | 3.77e-01 | 80.6% | 76.6% |
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 3.99e-01 | 79.2% | 92.4% |
| 1amiA04 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.54 | 40.0 | 2.84e-01 | 79.2% | 45.7% |
| 2re3A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.54 | 41.0 | 4.19e-01 | 88.9% | 87.1% |
| 3fm8D03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 39.0 | 3.51e-01 | 80.6% | 85.2% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.53 | 43.0 | 4.53e-01 | 91.7% | 100.0% |
| 4mtsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 38.0 | 3.20e-01 | 77.8% | 81.4% |
| 3oxhA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 36.0 | 3.11e-01 | 72.2% | 97.4% |
| 4fcaA04 | 2.60.40.3600 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 3.69e-01 | 76.4% | 89.7% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 3.84e-01 | 86.1% | 72.1% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 43.0 | 3.68e-01 | 94.4% | 73.3% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 39.0 | 3.14e-01 | 91.7% | 73.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.76 | 52.0 | 5.48e-01 | 84.7% | 78.5% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.76 | 49.0 | 5.21e-01 | 84.7% | 75.0% |
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 48.0 | 5.01e-01 | 98.6% | 80.0% |
| 3813762 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.68 | 50.0 | 5.26e-01 | 81.9% | 86.2% |
| 5052256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 50.0 | 4.55e-01 | 84.7% | 60.0% |
| 3715777 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 46.0 | 3.04e-01 | 73.6% | 28.5% |
| 4386715 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.64 | 50.0 | 4.75e-01 | 84.7% | 85.9% |
| 3744517 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.64 | 44.0 | 3.70e-01 | 73.6% | 43.3% |
| 3669779 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.64 | 44.0 | 3.53e-01 | 73.6% | 37.1% |
| 4968862 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 37.0 | 4.49e-01 | 77.8% | 95.6% |
| 665 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.62 | 40.0 | 4.11e-01 | 75.0% | 70.1% |
| 3842884 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.61 | 39.0 | 4.06e-01 | 75.0% | 69.1% |
| 3344565 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.60 | 47.0 | 3.02e-01 | 83.3% | 35.9% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.60 | 50.0 | 4.37e-01 | 100.0% | 61.9% |
| 3890480 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.59 | 40.0 | 4.01e-01 | 77.8% | 68.0% |
| 1032344 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.58 | 38.0 | 3.73e-01 | 73.6% | 60.5% |
| 3458064 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 40.0 | 4.54e-01 | 73.6% | 98.1% |
| 3423537 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.57 | 46.0 | 2.92e-01 | 91.7% | 76.2% |
| 3399965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 4.14e-01 | 84.7% | 68.9% |
| 4506574 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.55 | 45.0 | 3.11e-01 | 91.7% | 81.2% |
| 5023580 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 42.0 | 4.38e-01 | 91.7% | 93.8% |
| 4262428 | 2005.1.1.18 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase | 0.54 | 40.0 | 2.68e-01 | 87.5% | 18.4% |
| 3733399 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.54 | 44.0 | 2.62e-01 | 93.1% | 75.6% |
| 3698104 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 36.0 | 3.28e-01 | 70.8% | 97.1% |
| 3576768 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 42.0 | 3.13e-01 | 88.9% | 33.7% |
| 3430888 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.53 | 43.0 | 2.65e-01 | 94.4% | 94.9% |
| 3309559 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.53 | 39.0 | 2.67e-01 | 79.2% | 39.3% |
| 3230692 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 38.0 | 2.61e-01 | 79.2% | 24.6% |
| 3286642 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 38.0 | 3.45e-01 | 81.9% | 78.2% |
| 5037599 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 38.0 | 2.60e-01 | 80.6% | 22.1% |
| 3589473 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.52 | 43.0 | 4.22e-01 | 95.8% | 87.5% |
| 5064060 | 896.1.1.4 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › DDE_Tnp_IS66 | 0.51 | 39.0 | 3.94e-01 | 86.1% | 85.7% |
| 3599920 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 40.0 | 3.79e-01 | 83.3% | 94.1% |
| 3485043 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.51 | 38.0 | 2.75e-01 | 84.7% | 97.6% |
| 4008693 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.51 | 36.0 | 3.77e-01 | 94.4% | 84.6% |
| 5029245 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.51 | 37.0 | 3.49e-01 | 87.5% | 64.7% |
| 3952939 | 220.1.1.82 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 | 0.51 | 39.0 | 3.92e-01 | 87.5% | 89.3% |
| 3658595 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.50 | 39.0 | 4.04e-01 | 84.7% | 88.6% |
| 3273237 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.50 | 41.0 | 3.52e-01 | 94.4% | 80.0% |
| 3935835 | 2.1.1.68 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C | 0.50 | 44.0 | 3.55e-01 | 97.2% | 95.0% |
| 4011051 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.50 | 43.0 | 3.39e-01 | 98.6% | 99.4% |