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NODE_12_length_310542_cov_175.846709.1__X__X__00307
Bact-VirNODE_12_length_310542_cov_175.846709.1__X__X__00307
Identity
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-56
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.86 | 71.0 | 5.94e-01 | 90.6% | 77.0% |
| 1d2mA03 | 6.10.140.240 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 62.0 | 5.69e-01 | 79.2% | 71.2% |
| 6h5hA00 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.76 | 64.0 | 5.77e-01 | 92.5% | 80.3% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.69 | 49.0 | 3.41e-01 | 75.5% | 23.3% |
| 1dysA00 | 3.20.20.40 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 1, 4-beta cellobiohydrolase | 0.69 | 60.0 | 3.65e-01 | 96.2% | 93.9% |
| 1cpyA02 | 1.10.287.410 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 56.0 | 5.20e-01 | 100.0% | 97.2% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.65 | 58.0 | 4.61e-01 | 100.0% | 70.6% |
| 4nxiA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 50.0 | 3.55e-01 | 100.0% | 43.5% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.61 | 41.0 | 3.60e-01 | 73.6% | 68.1% |
| 7vevA01 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.60 | 49.0 | 3.30e-01 | 100.0% | 28.6% |
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.60 | 43.0 | 3.85e-01 | 79.2% | 59.0% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.57 | 46.0 | 4.04e-01 | 100.0% | 59.8% |
| 2p11A02 | 1.10.286.50 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.55 | 45.0 | 4.15e-01 | 98.1% | 78.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3789508 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.79 | 68.0 | 6.27e-01 | 100.0% | 94.3% |
| 4405603 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.75 | 66.0 | 4.09e-01 | 100.0% | 18.3% |
| 4995204 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.69 | 57.0 | 5.35e-01 | 100.0% | 81.4% |
| 4976855 | 142.1.1.52 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Rce1-like | 0.67 | 56.0 | 5.24e-01 | 100.0% | 94.3% |