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NODE_12_length_310542_cov_175.846709.1__X__X__00359

Bact-Vir

NODE_12_length_310542_cov_175.846709.1__X__X__00359

Identity

Kingdom:
phage

Quality

86.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-147
PDB
Domain cluster: rep: KT852578.1__ALJ98014.1__BMBtp1_22__00022__D5-71_86-155
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.63 55.0 5.60e-01 95.8% 99.3%
1yemB00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.61 32.0 3.09e-01 91.7% 43.4%
6grrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 28.0 3.40e-01 93.1% 67.3%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.58 45.0 4.89e-01 96.5% 100.0%
1z87A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 37.0 4.31e-01 91.7% 96.0%
7byjA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 34.0 3.99e-01 88.9% 90.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 24.0 3.31e-01 87.5% 84.4%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 32.0 3.80e-01 87.5% 83.7%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.55 28.0 3.47e-01 78.5% 77.8%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 41.0 4.57e-01 97.9% 100.0%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.53 38.0 2.84e-01 72.9% 57.3%
2oa9B02 3.30.70.3570 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain 0.52 31.0 3.32e-01 88.2% 67.7%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 35.0 3.79e-01 100.0% 81.5%
2xe4A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.51 37.0 2.83e-01 75.0% 61.4%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5014253 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.72 29.0 4.18e-01 94.4% 78.6%
3890928 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.65 57.0 5.33e-01 96.5% 92.8%
3866695 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.65 57.0 5.58e-01 96.5% 98.7%
3929256 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.63 54.0 5.51e-01 96.5% 95.7%
3483806 295.1.1.3 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.63 55.0 5.45e-01 95.8% 100.0%
3199763 220.1.1.202 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N 0.60 40.0 4.28e-01 95.8% 77.6%
4364087 3844.1.1.1 ↗ a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.60 28.0 3.09e-01 86.8% 52.2%
3616668 5.1.4.56 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › NUP214 0.57 40.0 2.90e-01 72.9% 57.0%
3619927 9.2.1.6 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 0.56 40.0 4.40e-01 86.1% 91.3%
3930399 4075.1.1.0 ↗ a+b complex topology › RGC domain › RGC domain › RGC domain 0.56 37.0 4.35e-01 96.5% 99.0%
3228242 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.55 33.0 3.85e-01 90.3% 84.0%
3675472 5.1.5.45 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.54 42.0 3.50e-01 99.3% 48.9%
3997968 5.1.5.128 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NUP159_NUP214 0.54 38.0 3.04e-01 72.2% 92.5%
5033931 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 38.0 2.91e-01 75.0% 41.7%
3935486 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 40.0 4.28e-01 96.5% 92.0%
3217673 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 32.0 3.66e-01 94.4% 81.9%
3889863 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.52 29.0 3.20e-01 87.5% 64.2%
3883159 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 27.0 3.27e-01 70.8% 76.7%
3577440 719.1.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.51 38.0 4.21e-01 76.4% 97.4%
3479464 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 37.0 4.13e-01 91.0% 94.8%
3791220 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.51 35.0 3.81e-01 92.4% 83.1%
3516048 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 28.0 3.28e-01 70.1% 76.0%