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NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00007
Bact-VirNODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00007
Identity
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-69
Domain cluster:
rep: NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00006__D3-59
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 38.0 | 4.37e-01 | 100.0% | 95.7% |
| 5ao6A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 51.0 | 4.58e-01 | 100.0% | 97.9% |
| 1wdiA02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.58 | 34.0 | 3.40e-01 | 100.0% | 53.4% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 43.0 | 3.46e-01 | 100.0% | 40.5% |
| 3axbA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.57 | 48.0 | 3.63e-01 | 100.0% | 50.3% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 4.12e-01 | 100.0% | 96.2% |
| 3pubA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 44.0 | 3.53e-01 | 100.0% | 91.3% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 38.0 | 3.26e-01 | 77.6% | 82.1% |
| 1y56B02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.53 | 45.0 | 3.56e-01 | 100.0% | 49.7% |
| 1alo006 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.52 | 35.0 | 2.97e-01 | 98.5% | 38.1% |
| 6p0cA03 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.51 | 37.0 | 3.14e-01 | 80.6% | 100.0% |
| 8dqaA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.50 | 43.0 | 3.88e-01 | 100.0% | 98.0% |
| 5n1qB02 | 3.30.70.470 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.40e-01 | 100.0% | 88.4% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4976701 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 41.0 | 4.69e-01 | 100.0% | 88.0% |
| 3675341 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 42.0 | 4.58e-01 | 100.0% | 85.5% |
| 3436022 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.61 | 41.0 | 4.44e-01 | 100.0% | 83.6% |
| 4048663 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.60 | 38.0 | 4.44e-01 | 100.0% | 97.8% |
| 4169657 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.58 | 37.0 | 4.19e-01 | 100.0% | 88.0% |
| 3608441 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.58 | 49.0 | 3.09e-01 | 100.0% | 21.0% |
| 4583465 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.58 | 38.0 | 4.22e-01 | 97.0% | 88.0% |
| 4331473 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.58 | 39.0 | 3.75e-01 | 100.0% | 58.7% |
| 4336500 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.58 | 38.0 | 4.09e-01 | 100.0% | 81.8% |
| 1646641 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.57 | 48.0 | 4.17e-01 | 100.0% | 81.8% |
| 4571610 | 4.1.1.245 ↗ | beta barrels › SH3 › SH3 › SH3 › SspH | 0.56 | 37.0 | 3.89e-01 | 97.0% | 76.3% |
| 5033623 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.56 | 48.0 | 3.56e-01 | 100.0% | 80.0% |
| 4559454 | 4.1.3.2 ↗ | beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › SHCBP_N | 0.55 | 43.0 | 3.46e-01 | 88.1% | 62.9% |
| 3758777 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.52 | 40.0 | 2.58e-01 | 91.0% | 87.7% |
| 3880639 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.52 | 42.0 | 3.59e-01 | 100.0% | 54.5% |
| None | — | 0.51 | 36.0 | 2.87e-01 | 79.1% | 50.6% |