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NODE_14_length_293356_cov_397-335986_prodigal-single.1XX__00029

Bact-Vir

NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00029

Identity

Kingdom:: phage

Quality

94.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-86

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2wssA01	2.40.30.20	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.60	34.0	3.22e-01	93.5%	46.2%
6oqrA01	2.40.30.20	Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 ›	0.59	34.0	3.24e-01	93.5%	47.8%
1wdiA02	2.40.10.240	Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like	0.58	36.0	3.67e-01	100.0%	64.4%
1zyoA02	2.40.10.10	Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases	0.57	35.0	3.50e-01	100.0%	56.6%
6j5cA02	3.30.67.10	Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2	0.54	41.0	4.05e-01	93.5%	75.9%
3iylW05	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.53	40.0	3.80e-01	100.0%	66.7%
6bogA02	2.30.30.930	Mainly Beta › Roll › SH3 type barrels. ›	0.53	36.0	4.04e-01	93.5%	93.3%
1pj5A01	3.50.50.60	Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain	0.52	40.0	2.97e-01	89.6%	87.1%
1jofA00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.51	39.0	2.60e-01	87.0%	88.2%
4g59C02	3.30.500.30	Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 ›	0.50	40.0	3.27e-01	90.9%	88.0%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5013892	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.67	41.0	4.72e-01	93.5%	87.3%
4975150	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.64	42.0	4.62e-01	72.7%	85.0%
3634374	1.1.7.17 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N	0.62	36.0	4.43e-01	74.0%	90.0%
4512995	1.1.7.17 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N	0.61	35.0	3.69e-01	70.1%	62.9%
3347504	4.2.1.4 ↗	beta barrels › SH3 › SAND › SAND › TDBD	0.60	43.0	4.51e-01	98.7%	82.9%
4998666	316.1.1.0 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase	0.59	49.0	3.54e-01	89.6%	64.8%
3715776	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.57	37.0	4.00e-01	84.4%	80.0%
4983553	316.1.1.27 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta	0.53	46.0	3.36e-01	92.2%	62.1%
4210618	3735.1.1.12 ↗	beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › RHS_repeat, DUF6531, TEN_YD-shell	0.53	41.0	2.63e-01	87.0%	21.1%
4433757	3347.1.1.3 ↗	beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › RHS_repeat, DUF6531	0.53	41.0	2.62e-01	87.0%	21.1%
3649175	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.51	38.0	2.47e-01	80.5%	51.5%
3979006	77.1.1.15 ↗	beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › RHS_repeat, DUF6531, TEN_YD-shell	0.50	39.0	2.45e-01	87.0%	20.2%
3292420	1.1.7.17 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N	0.50	38.0	3.67e-01	87.0%	70.0%
5048147	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.50	44.0	3.95e-01	94.8%	88.6%