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NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00056
Bact-VirNODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00056
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-101
Domain cluster:
rep: NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00064__D8-104
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hwdD00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.64 | 31.0 | 3.23e-01 | 91.9% | 47.8% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 45.0 | 4.52e-01 | 94.9% | 74.7% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 50.0 | 4.53e-01 | 100.0% | 64.4% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 44.0 | 4.53e-01 | 99.0% | 77.3% |
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.62 | 29.0 | 3.37e-01 | 100.0% | 59.5% |
| 3hgkE00 | 1.20.1280.110 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.58 | 31.0 | 3.47e-01 | 93.9% | 63.6% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.58 | 30.0 | 2.81e-01 | 87.9% | 37.0% |
| 2o36A01 | 1.20.1050.40 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › Endopeptidase. Chain P; domain 1 | 0.58 | 28.0 | 2.63e-01 | 100.0% | 33.6% |
| 2yviA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 45.0 | 4.74e-01 | 93.9% | 95.5% |
| 1nt2B02 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 30.0 | 3.51e-01 | 100.0% | 73.1% |
| 1e2aA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.54 | 29.0 | 2.88e-01 | 100.0% | 48.0% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.52 | 45.0 | 3.59e-01 | 98.0% | 78.8% |
| 4xxiA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.52 | 40.0 | 3.51e-01 | 80.8% | 77.6% |
| 4e40A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.51 | 43.0 | 3.31e-01 | 94.9% | 74.7% |
| 6arhA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 3.08e-01 | 93.9% | 91.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3476361 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.63 | 47.0 | 4.42e-01 | 100.0% | 65.8% |
| 3970271 | 3755.1.1.8 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › FliJ | 0.62 | 29.0 | 2.70e-01 | 100.0% | 35.2% |
| 3345767 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.61 | 46.0 | 4.30e-01 | 97.0% | 64.8% |
| 3925709 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 53.0 | 4.73e-01 | 99.0% | 75.0% |
| 3479515 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 32.0 | 2.95e-01 | 88.9% | 46.4% |
| 4642325 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.53 | 27.0 | 2.46e-01 | 99.0% | 34.6% |
| 5074535 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 30.0 | 2.82e-01 | 87.9% | 43.3% |