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NODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00309
Bact-VirNODE_14_length_293356_cov_397-335986_prodigal-single.1__X__X__00309
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-138
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.63 | 31.0 | 3.33e-01 | 94.9% | 52.8% |
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.61 | 33.0 | 3.70e-01 | 100.0% | 66.4% |
| 5da9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 33.0 | 2.43e-01 | 100.0% | 19.9% |
| 1lshB00 | 2.20.90.10 | Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain | 0.61 | 28.0 | 2.54e-01 | 80.1% | 33.3% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 33.0 | 3.43e-01 | 99.3% | 54.8% |
| 2zuoA10 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.59 | 35.0 | 3.80e-01 | 100.0% | 69.3% |
| 1aq3A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.54 | 32.0 | 3.33e-01 | 73.5% | 60.5% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 31.0 | 3.44e-01 | 92.6% | 70.3% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.53 | 43.0 | 4.07e-01 | 98.5% | 71.7% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 40.0 | 3.90e-01 | 100.0% | 71.1% |
| 4i3gA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.30e-01 | 100.0% | 66.7% |
| 3ulpD00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 34.0 | 3.70e-01 | 95.6% | 78.8% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 29.0 | 3.57e-01 | 80.1% | 92.2% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 26.0 | 2.67e-01 | 82.4% | 45.3% |
| 7f79A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 37.0 | 3.46e-01 | 97.8% | 60.2% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 30.0 | 3.34e-01 | 87.5% | 71.8% |
| 1ex0A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 28.0 | 3.16e-01 | 98.5% | 70.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3719141 | 230.5.1.2 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder | 0.61 | 35.0 | 2.77e-01 | 100.0% | 29.1% |
| 3718698 | 230.5.1.2 ↗ | a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain › MVP_shoulder | 0.61 | 35.0 | 2.72e-01 | 100.0% | 26.4% |
| 3856363 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 35.0 | 3.24e-01 | 80.9% | 49.1% |
| 3995523 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.56 | 35.0 | 3.24e-01 | 72.8% | 48.8% |
| 3623034 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.55 | 35.0 | 3.16e-01 | 74.3% | 45.8% |
| 3571722 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 30.0 | 3.17e-01 | 86.8% | 60.8% |
| 4928831 | 825.1.1.0 ↗ | beta complex topology › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins › Aerolysin family of pore-forming toxins | 0.53 | 41.0 | 3.52e-01 | 82.4% | 94.6% |
| 4358482 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.53 | 38.0 | 2.42e-01 | 80.1% | 13.5% |
| 5073601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 31.0 | 3.73e-01 | 85.3% | 85.3% |
| 4960416 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 34.0 | 4.14e-01 | 80.9% | 100.0% |
| 3875869 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.52 | 31.0 | 3.48e-01 | 72.1% | 74.5% |
| 3935986 | 223.2.1.4 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENN,uDENN | 0.51 | 38.0 | 3.33e-01 | 75.7% | 70.3% |
| 4956126 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 28.0 | 3.11e-01 | 99.3% | 66.7% |
| 3249225 | 223.2.1.6 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN | 0.50 | 34.0 | 3.28e-01 | 98.5% | 59.4% |