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NPH-1_transcription_termination_factor
Euk-VirFlamingopox_virus_FGPVKD09
NPH-1_transcription_termination_factor__YP_009447969__Flamingopox_virus_FGPVKD09__2059380
Identity
- Accession:
- YP_009447969 ↗
- Protein ID:
- NPH-1_transcription_termination_factor
- Kingdom:
- euk
Quality
82.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Avipoxvirus›
Flamingopox_virus_FGPVKD09
TaxID: 2059380
Cluster
View cluster (106 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-241_525-561
Domain cluster:
rep: HQ123590.1__ADW08988.1__CN77-20-1__00001__D9-139_144-252
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00176.30 best | SNF2-rel_dom | 116.0 | 2.50e-33 | 84.7% | 75.7% |
| PF04851.22 | ResIII | 48.0 | 1.90e-12 | 58.6% | 97.6% |
| PF08469.16 | NPHI_C | 51.2 | 1.90e-13 | 17.4% | 29.0% |
D2
high
residues 574-633
D3
medium
residues 243-266_345-509
Domain cluster:
rep: IMGVR_UViG_3300026211_000011-3300026211-Ga0208132_10019531__D46-252
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 52.0 | 1.10e-13 | 61.4% | 93.6% |
| PF08469.16 | NPHI_C | 30.4 | 5.20e-07 | 13.2% | 16.2% |