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NPH-I_-transcription_termination_factor-
Euk-VirDeerpox_virus_W-848-83
NPH-I_-transcription_termination_factor-__YP_227472__Deerpox_virus_W-848-83__305674
Identity
- Accession:
- YP_227472 ↗
- Protein ID:
- NPH-I_-transcription_termination_factor-
- Kingdom:
- euk
Quality
89.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Cervidpoxvirus›
Deerpox_virus_W-848-83
TaxID: 305674
Cluster
View cluster (106 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-240_523-562
Domain cluster:
rep: HQ123590.1__ADW08988.1__CN77-20-1__00001__D9-139_144-252
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00176.30 best | SNF2-rel_dom | 149.5 | 1.50e-43 | 83.2% | 77.1% |
| PF04851.22 | ResIII | 51.2 | 1.90e-13 | 57.7% | 98.2% |
| PF08469.16 | NPHI_C | 60.5 | 2.70e-16 | 17.9% | 30.4% |
D2
high
residues 572-632
Domain cluster:
rep: nucleoside_triphosphatase_I__YP_009329721__BeAn_58058_virus__67082__D316-368
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08469.16 best | NPHI_C | 94.3 | 9.90e-27 | 100.0% | 40.5% |
D3
medium
residues 243-267_363-514
Domain cluster:
rep: IMGVR_UViG_3300026211_000011-3300026211-Ga0208132_10019531__D46-252
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 48.5 | 1.30e-12 | 65.5% | 93.6% |
| PF08469.16 | NPHI_C | 41.9 | 1.50e-10 | 17.0% | 20.3% |