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NS1
Euk-VirKampung_Karu_virus
NS1__YP_009553729__Kampung_Karu_virus__2045186
Identity
- Accession:
- YP_009553729 ↗
- Protein ID:
- NS1
- Kingdom:
- euk
Quality
83.8
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Orthoflavivirus›
Kampung_Karu_virus
TaxID: 2045186
Cluster
View cluster (33 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-167
Domain cluster:
rep: non-structural_protein_NS1__NP_775517__Powassan_virus__11083__D32-172
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 134.1 | 8.30e-39 | 100.0% | 41.1% |
D2
medium
residues 177-343
Domain cluster:
rep: NS1__YP_009389241__Karumba_virus__1969397__D203-357
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00948.27 best | Flavi_NS1 | 202.7 | 1.20e-59 | 100.0% | 45.6% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 31.0 | 3.98e-01 | 91.0% | 90.4% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.57 | 27.0 | 3.43e-01 | 87.4% | 74.0% |
| 1rwhA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.51 | 32.0 | 3.78e-01 | 82.0% | 92.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1282876 | 3829.1.1.1 ↗ | beta meanders › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavivirus non-structural protein 1 (NS1) beta-meander domain › Flavi_NS1 | 0.97 | 95.0 | 9.06e-01 | 100.0% | 88.4% |
| 4875075 | 3828.1.1.1 ↗ | a/b three-layered sandwiches › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavivirus non-structural protein 1 (NS1) a/b domain › Flavi_NS1 | 0.97 | 94.0 | 9.33e-01 | 99.4% | 97.1% |
| 4079675 | 4959.1.1.1 ↗ | a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 | 0.63 | 21.0 | 2.60e-01 | 100.0% | 44.0% |