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NS1_protein
Euk-VirHuman_erythrovirus_V9
NS1_protein__NP_694863__Human_erythrovirus_V9__72197
Identity
- Accession:
- NP_694863 ↗
- Protein ID:
- NS1_protein
- Kingdom:
- euk
Quality
69.0
mean pLDDT
Taxonomy
Shotokuvirae›
Cossaviricota›
Quintoviricetes›
Piccovirales›
Parvoviridae›
Erythroparvovirus›
Human_erythrovirus_V9
TaxID: 72197
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-174
Domain cluster:
rep: NS1__YP_009507375__Chipmunk_parvovirus__56820__D1-203
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08724.17 best | Rep_N | 185.9 | 8.90e-55 | 99.4% | 88.7% |
D2
medium
residues 220-269
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 41.0 | 1.70e-10 | 100.0% | 17.7% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u0jA01 | 1.10.10.950 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.82 | 73.0 | 7.12e-01 | 100.0% | 90.9% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 43.0 | 4.13e-01 | 94.0% | 69.0% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.54 | 46.0 | 3.94e-01 | 98.0% | 85.9% |
| 2gk6A03 | 6.10.140.1240 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 44.0 | 4.42e-01 | 92.0% | 90.0% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 43.0 | 3.66e-01 | 94.0% | 56.6% |
D3
medium
residues 319-372
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 96.1 | 2.60e-27 | 100.0% | 19.9% |
| PF00004.36 | AAA | 23.8 | 7.40e-05 | 88.9% | 24.4% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.98 | 93.0 | 5.97e-01 | 100.0% | 26.2% |
| 2ipiA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 51.0 | 3.50e-01 | 100.0% | 30.3% |
| 2uuuA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.62 | 50.0 | 3.41e-01 | 96.3% | 76.8% |
| 6eo5B01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.60 | 49.0 | 3.33e-01 | 100.0% | 72.7% |
| 1wvfA01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.59 | 48.0 | 3.94e-01 | 96.3% | 70.4% |
| 7qh2C01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.58 | 48.0 | 4.22e-01 | 100.0% | 76.9% |
| 4pzaB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.58 | 46.0 | 3.19e-01 | 94.4% | 70.0% |
| 3pm9A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.58 | 48.0 | 4.13e-01 | 100.0% | 76.3% |
| 2qjoA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.56 | 41.0 | 2.86e-01 | 79.6% | 49.0% |
| 2d1pA00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.55 | 40.0 | 3.14e-01 | 81.5% | 90.8% |
| 5h66A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.97e-01 | 87.0% | 81.8% |
| 2w3sA03 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.55 | 40.0 | 4.14e-01 | 92.6% | 90.0% |
| 1hskA02 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.53 | 44.0 | 3.87e-01 | 100.0% | 93.2% |
| 2ozpA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 42.0 | 3.18e-01 | 100.0% | 88.0% |
| 3p12A01 | 3.40.1650.10 | Alpha Beta › 3-Layer(aba) Sandwich › RbsD-like fold › RbsD-like domain | 0.51 | 41.0 | 3.30e-01 | 98.1% | 72.6% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4880005 | 10.2.1.16 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Parvo_NS1 | 0.98 | 93.0 | 6.35e-01 | 100.0% | 34.2% |
| 3670820 | 2004.1.1.232 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 | 0.67 | 56.0 | 4.36e-01 | 94.4% | 58.0% |
| 3511899 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.63 | 44.0 | 3.49e-01 | 75.9% | 51.7% |
| 2319481 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.61 | 50.0 | 3.51e-01 | 100.0% | 86.0% |
| 4060041 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.61 | 50.0 | 3.43e-01 | 100.0% | 31.6% |
| 1562384 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.59 | 48.0 | 3.38e-01 | 100.0% | 33.0% |
D4
medium
residues 373-437
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01057.24 best | Parvo_NS1 | 84.5 | 9.20e-24 | 100.0% | 24.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.94 | 81.0 | 5.48e-01 | 100.0% | 28.6% |
| 1tueD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 50.0 | 3.63e-01 | 100.0% | 29.2% |
| 7wu7501 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 41.0 | 3.40e-01 | 76.9% | 53.2% |
| 6ketA01 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.55 | 44.0 | 2.88e-01 | 93.8% | 39.1% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 38.0 | 3.16e-01 | 78.5% | 51.9% |
| 1whrA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.52 | 40.0 | 3.39e-01 | 89.2% | 76.6% |
| 2i7gB00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.51 | 40.0 | 2.64e-01 | 93.8% | 49.0% |
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.50 | 38.0 | 2.99e-01 | 92.3% | 79.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2704206 | 2004.1.1.57 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Parvo_NS1 | 0.87 | 79.0 | 5.07e-01 | 100.0% | 23.6% |
| 3945876 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.66 | 52.0 | 3.56e-01 | 100.0% | 22.6% |
| 4931926 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 52.0 | 3.41e-01 | 100.0% | 19.4% |
| 3409778 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 43.0 | 3.58e-01 | 76.9% | 53.1% |
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 51.0 | 3.50e-01 | 100.0% | 42.3% |
| 3541 | 4107.1.1.1 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › ABATE,zf-CGNR | 0.54 | 43.0 | 3.23e-01 | 92.3% | 80.4% |
| 3288748 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.54 | 43.0 | 2.81e-01 | 93.8% | 38.6% |
| 5045091 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.53 | 43.0 | 2.88e-01 | 93.8% | 61.1% |