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NS2
Euk-VirLebombo_virus
NS2__YP_009507711__Lebombo_virus__40057
Identity
- Accession:
- YP_009507711 ↗
- Protein ID:
- NS2
- Kingdom:
- euk
Quality
76.3
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Sedoreoviridae›
Orbivirus›
Lebombo_virus
TaxID: 40057
Cluster
View cluster (7 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-128
Domain cluster:
rep: viral_inclusion_body_protein__YP_009158888__Wad_Medani_virus__40067__D17-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04514.20 best | BTV_NS2 | 180.1 | 1.30e-52 | 100.0% | 30.8% |
D2
high
residues 264-344
Domain cluster:
rep: single-stranded_RNA-binding_protein__YP_009551618__Guangxi_orbivirus__2306813__D349-434
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04514.20 best | BTV_NS2 | 76.7 | 3.40e-21 | 100.0% | 21.9% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ejqB00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.55 | 39.0 | 3.49e-01 | 100.0% | 53.0% |
| 3w5mA06 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.54 | 30.0 | 2.83e-01 | 100.0% | 42.0% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 39.0 | 2.93e-01 | 82.7% | 93.1% |
| 4g84A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.51 | 35.0 | 2.38e-01 | 100.0% | 17.7% |
| 1jmxA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.21e-01 | 76.5% | 91.1% |
| 2nncA00 | 2.60.40.2470 | Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain | 0.50 | 43.0 | 3.95e-01 | 97.5% | 94.5% |
| 5aozA00 | 2.60.40.680 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.04e-01 | 75.3% | 87.9% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3178085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 3.46e-01 | 75.3% | 77.8% |
| 3410270 | 11.1.1.605 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_NUP210_9th | 0.52 | 37.0 | 3.79e-01 | 75.3% | 93.8% |