←Back to structures
NS38
Euk-VirAmerican_grass_carp_reovirus
NS38__YP_001837103__American_grass_carp_reovirus__465447
Identity
- Accession:
- YP_001837103 ↗
- Protein ID:
- NS38
- Kingdom:
- euk
Quality
71.6
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Spinareoviridae›
Aquareovirus›
American_grass_carp_reovirus
TaxID: 465447
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-67_83-252
Domain cluster:
representative
D2
medium
residues 253-350
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7mi4A02 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.75 | 30.0 | 3.43e-01 | 70.4% | 48.6% |
| 7kfuC01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.71 | 29.0 | 3.30e-01 | 70.4% | 48.0% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.69 | 32.0 | 3.19e-01 | 70.4% | 40.8% |
| 8d3lA01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.66 | 29.0 | 3.09e-01 | 71.4% | 44.3% |
| 4n06A01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.62 | 27.0 | 2.98e-01 | 70.4% | 45.1% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 31.0 | 3.51e-01 | 83.7% | 70.3% |
| 2rh0A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 30.0 | 3.53e-01 | 78.6% | 85.9% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.51 | 36.0 | 2.94e-01 | 75.5% | 41.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4971298 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.58 | 31.0 | 3.52e-01 | 75.5% | 68.0% |
| 3991064 | 319.1.1.11 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › SGS | 0.57 | 32.0 | 2.88e-01 | 79.6% | 38.1% |
| 4991400 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.50 | 41.0 | 3.34e-01 | 88.8% | 64.2% |