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NS3_proteinase_ATPase_helicase

Euk-Vir

GB_virus_C

NS3_proteinase_ATPase_helicase__NP_803205__GB_virus_C__54290

Identity

Accession:
NP_803205 ↗
Protein ID:
NS3_proteinase_ATPase_helicase
Kingdom:
euk

Quality

82.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 176-322
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00270.36 best DEAD 25.8 1.10e-05 83.0% 66.5%
D2 high residues 336-473
PDB
D3 medium residues 21-93
PDB
D4 medium residues 94-175
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02907.22 best Peptidase_S29 114.1 6.60e-33 100.0% 54.4%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.95 91.0 9.03e-01 100.0% 100.0%
4b6eB01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.94 90.0 6.47e-01 100.0% 43.1%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.78 72.0 5.28e-01 100.0% 54.2%
1arbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 69.0 5.95e-01 96.3% 80.3%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 71.0 6.44e-01 100.0% 95.3%
1boqA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.76 65.0 5.92e-01 92.7% 87.9%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 69.0 6.25e-01 100.0% 97.2%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 62.0 6.56e-01 92.7% 100.0%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 68.0 5.96e-01 100.0% 80.9%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 63.0 5.61e-01 96.3% 88.9%
3fzzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 63.0 5.56e-01 96.3% 89.2%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 66.0 6.03e-01 100.0% 95.2%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 64.0 5.94e-01 100.0% 98.1%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.71 50.0 5.24e-01 75.6% 80.0%
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 51.0 5.51e-01 84.1% 95.4%
1ep5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 59.0 5.85e-01 97.6% 88.4%
1wzoA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.69 31.0 4.17e-01 84.1% 82.5%
8e7cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 54.0 5.43e-01 84.1% 95.1%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 63.0 5.80e-01 100.0% 100.0%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 63.0 5.83e-01 98.8% 81.2%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 61.0 5.55e-01 96.3% 83.8%
1agjA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 58.0 4.93e-01 95.1% 64.9%
1arbA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 53.0 4.51e-01 86.6% 73.0%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.66 54.0 4.93e-01 90.2% 76.6%
3l6pA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 57.0 5.23e-01 93.9% 73.3%
1l1jA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 54.0 4.84e-01 91.5% 83.9%
3u28C00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.66 49.0 4.75e-01 96.3% 70.7%
2bhgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 57.0 5.36e-01 100.0% 94.1%
5y2dA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.65 51.0 4.54e-01 86.6% 58.3%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 54.0 4.56e-01 96.3% 91.8%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 47.0 4.89e-01 89.0% 86.8%
4q63A00 2.40.10.430 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 50.0 4.87e-01 89.0% 82.8%
2eqnA01 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.62 49.0 4.81e-01 97.6% 79.3%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 53.0 4.20e-01 96.3% 73.8%
3f3bA00 2.40.10.370 Mainly Beta › Beta Barrel › Thrombin, subunit H › Protein of unknown function DUF3599 0.62 50.0 4.54e-01 90.2% 97.4%
1jeyB02 2.40.290.10 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › 0.61 49.0 3.81e-01 91.5% 92.5%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.60 40.0 4.12e-01 72.0% 73.1%
1lmiA00 2.60.40.1240 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 40.0 3.49e-01 73.2% 97.7%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 46.0 4.51e-01 90.2% 82.4%
3vseA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.55 42.0 4.49e-01 85.4% 98.6%
2nyyA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 39.0 3.07e-01 84.1% 59.0%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.51 35.0 3.23e-01 70.7% 62.2%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1161323 1.1.5.14 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S29 0.94 90.0 6.68e-01 100.0% 48.1%
3194806 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 73.0 4.90e-01 100.0% 43.4%
3199494 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 70.0 5.08e-01 98.8% 49.1%
4247805 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.78 71.0 5.15e-01 98.8% 44.1%
4387060 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 71.0 5.11e-01 98.8% 43.3%
None 0.77 71.0 5.14e-01 98.8% 44.3%
4031177 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.77 71.0 5.09e-01 98.8% 43.5%
4022015 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.77 71.0 4.96e-01 100.0% 39.2%
5035938 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 70.0 5.02e-01 100.0% 44.4%
4960051 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.76 69.0 5.34e-01 100.0% 58.0%
3454710 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.75 68.0 4.95e-01 100.0% 50.0%
140973 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.75 69.0 4.90e-01 100.0% 45.8%
4647114 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.75 68.0 4.77e-01 98.8% 42.1%
22087 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.75 63.0 4.47e-01 92.7% 38.8%
3409561 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.85e-01 100.0% 53.0%
3962616 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 69.0 5.31e-01 100.0% 61.2%
1826904 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 63.0 4.49e-01 93.9% 38.7%
3448643 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.74 67.0 4.97e-01 100.0% 49.3%
3106034 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 63.0 4.48e-01 92.7% 39.7%
4883897 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.74 63.0 4.49e-01 93.9% 38.9%
None 0.74 68.0 4.88e-01 98.8% 42.3%
4625374 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.74 68.0 4.81e-01 100.0% 48.3%
1096110 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.74 68.0 4.86e-01 98.8% 41.7%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.73 68.0 4.88e-01 100.0% 42.8%
4620869 1.1.5.57 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.73 67.0 4.32e-01 100.0% 42.0%
None 0.73 68.0 4.87e-01 100.0% 43.3%
5063379 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.73 66.0 5.08e-01 100.0% 52.2%
4942485 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.73 56.0 5.70e-01 84.1% 83.7%
4259810 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.73 50.0 5.12e-01 76.8% 73.8%
3960372 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.73 65.0 6.44e-01 96.3% 98.8%
3654499 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.72 65.0 5.61e-01 97.6% 81.6%
3960060 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 67.0 5.03e-01 100.0% 48.1%
3448847 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.72 67.0 4.52e-01 100.0% 37.1%
4059005 1.1.17.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S7 0.71 64.0 4.49e-01 100.0% 56.5%
4338510 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.71 63.0 4.69e-01 100.0% 47.4%
3439936 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.71 63.0 4.34e-01 100.0% 37.2%
5077063 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.71 49.0 5.12e-01 75.6% 78.7%
3449628 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 65.0 5.74e-01 100.0% 85.2%
4964309 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.70 50.0 5.24e-01 75.6% 82.4%
5059785 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 52.0 5.29e-01 78.0% 81.2%
3672433 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 64.0 4.29e-01 100.0% 32.1%
5041618 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.70 51.0 4.86e-01 76.8% 68.1%
3574784 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 51.0 4.64e-01 78.0% 64.5%
4945432 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 50.0 4.97e-01 78.0% 72.9%
3957702 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.69 56.0 4.73e-01 87.8% 56.3%
22093 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.69 62.0 4.54e-01 98.8% 43.7%
2429362 1.1.5.4 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S3 0.69 58.0 4.50e-01 98.8% 42.2%
5074238 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 48.0 5.04e-01 75.6% 80.0%
5041607 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 48.0 5.04e-01 75.6% 81.1%
3674829 1.1.13.61 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Gar1 0.68 54.0 5.77e-01 85.4% 98.6%
5048051 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.68 50.0 4.91e-01 79.3% 71.9%
5000784 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.67 49.0 4.61e-01 78.0% 63.0%
3248403 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.67 61.0 5.12e-01 100.0% 60.7%
None 0.67 59.0 4.70e-01 98.8% 52.4%
4499041 1.1.5.57 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 0.66 60.0 4.45e-01 100.0% 58.5%
3066474 1.1.17.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.66 58.0 4.38e-01 100.0% 48.6%
3172153 1.1.7.20 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 0.66 55.0 4.87e-01 97.6% 63.5%
4881628 1.1.5.4 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S3 0.65 52.0 5.27e-01 93.9% 87.8%
169988 1.1.5.6 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S7 0.65 57.0 4.55e-01 100.0% 50.9%
3942828 1.1.13.39 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 0.63 50.0 4.21e-01 89.0% 92.4%
3262549 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 56.0 4.08e-01 100.0% 40.4%
3821077 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.60 41.0 2.73e-01 73.2% 36.3%
4389625 375.1.1.47 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › BshC 0.53 29.0 3.41e-01 87.8% 78.2%
1692496 58.2.1.1 beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N 0.51 42.0 3.44e-01 95.1% 78.1%
D5 medium residues 519-626
PDB