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NS5-like_protein

Euk-Vir

Wuhan_cricket_virus

NS5-like_protein__YP_009179405__Wuhan_cricket_virus__1746070

Identity

Accession:
YP_009179405 ↗
Protein ID:
NS5-like_protein
Kingdom:
euk

Quality

80.3 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Flasuviricetes› Amarillovirales› Flaviviridae› Wuhan_cricket_virus

TaxID: 1746070

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 95-288
PDB
Domain cluster: rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01728.26 best FtsJ 28.1 2.50e-06 90.7% 96.7%
D2 high residues 750-924
PDB
Domain cluster: rep: RNA-dependent_RNA_polymerase_NS5__YP_009268628__Hanko_virus__1125677__D698-878
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20483.4 best Flavi_NS5_thumb 124.7 5.00e-36 91.4% 88.4%
D3 medium residues 328-409_616-637
PDB
Domain cluster: rep: NS5-like_protein__YP_009179403__Wuhan_flea_virus__1746071__D315-356_368-395_444-456_471-503_597-617
D4 medium residues 410-432_538-575_638-749
PDB
Domain cluster: rep: RdRp__YP_004940021__Chocolate_lily_virus_A__1120751__D251-280_349-443
D5 medium residues 433-498_510-537_576-615
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.61 34.0 4.10e-01 88.1% 81.6%
2a3vB01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.60 36.0 4.19e-01 91.0% 84.0%
1mhyG02 1.20.1280.30 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 0.59 28.0 3.60e-01 98.5% 79.5%
2r7rA05 1.10.357.80 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › 0.57 51.0 4.61e-01 100.0% 72.7%
3s0aA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.52 36.0 3.80e-01 100.0% 79.8%
1h99A01 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.51 33.0 3.66e-01 96.3% 83.7%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4875416 304.48.1.13 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Flavi_NS5 0.90 87.0 5.93e-01 100.0% 43.1%
5366 304.48.1.15 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RdRP_3 0.83 79.0 5.46e-01 100.0% 46.7%
3934732 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 27.0 3.68e-01 97.8% 89.2%
4369223 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.54 44.0 3.34e-01 86.6% 80.3%
4968904 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.51 38.0 2.89e-01 91.8% 32.3%