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NS5B
Euk-VirSimian_pegivirus
NS5B__YP_009045181__Simian_pegivirus__1454041
Identity
- Accession:
- YP_009045181 ↗
- Protein ID:
- NS5B
- Kingdom:
- euk
Quality
89.4
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Flasuviricetes›
Amarillovirales›
Flaviviridae›
Pegivirus›
Simian_pegivirus
TaxID: 1454041
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 351-538
Domain cluster:
rep: NS5B_RNA-dependent_RNA_polymerase__YP_009272656__Hepatitis_C_virus_genotype_5__33746__D391-472_498-585
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 70.2 | 2.20e-19 | 77.1% | 27.4% |
D2
medium
residues 49-181_222-277
Domain cluster:
rep: hypothetical_protein_3__YP_009345007__Wuhan_spider_virus_8__1923757__D1-105_147-200
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 55.9 | 4.50e-15 | 70.9% | 26.8% |
| PF00998.29 | RdRP_3 | 44.4 | 1.40e-11 | 30.2% | 12.1% |
D3
medium
residues 182-221_278-350
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00998.29 best | RdRP_3 | 48.2 | 1.00e-12 | 64.6% | 15.0% |
| PF00998.29 | RdRP_3 | 49.9 | 3.10e-13 | 37.2% | 8.2% |