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NSP2
Euk-VirRotavirus_A
NSP2__YP_002302221__Rotavirus_A__28875
Identity
- Accession:
- YP_002302221 ↗
- Protein ID:
- NSP2
- Kingdom:
- euk
Quality
75.4
mean pLDDT
Taxonomy
Orthornavirae›
Duplornaviricota›
Resentoviricetes›
Reovirales›
Sedoreoviridae›
Rotavirus›
Rotavirus_A
TaxID: 28875
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-106
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21067.3 best | Rota_NS35_N | 201.9 | 5.90e-60 | 100.0% | 74.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g0aA01 | 3.90.1400.10 | Alpha Beta › Alpha-Beta Complex › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.99 | 97.0 | 8.44e-01 | 100.0% | 72.9% |
| 2gu0A01 | 3.90.1400.10 | Alpha Beta › Alpha-Beta Complex › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.93 | 89.0 | 7.90e-01 | 100.0% | 73.9% |
| 6j95A01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 46.0 | 3.06e-01 | 96.2% | 72.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 85688 | 839.1.1.0 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.98 | 95.0 | 8.35e-01 | 100.0% | 73.9% |
| 2784753 | 839.1.1.2 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rota_NS35_N | 0.97 | 94.0 | 8.25e-01 | 100.0% | 73.4% |
| 161774 | 839.1.1.0 ↗ | a+b complex topology › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain › Rotavirus NSP2 fragment, N-terminal domain | 0.93 | 89.0 | 7.94e-01 | 100.0% | 75.0% |
| 3591322 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.54 | 46.0 | 3.07e-01 | 96.2% | 65.8% |
| 4958580 | 306.6.1.5 ↗ | a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like › DUF2113 | 0.54 | 35.0 | 4.12e-01 | 100.0% | 93.3% |
| 3209353 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 43.0 | 2.98e-01 | 95.2% | 64.3% |
| 4018367 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.51 | 43.0 | 2.79e-01 | 96.2% | 35.7% |
| 3879593 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.50 | 44.0 | 2.88e-01 | 98.1% | 67.4% |
D2
medium
residues 146-317