NSP2

Euk-Vir

Rotavirus_G_chicken_03V0567_DEU_2003

NSP2__YP_008136236__Rotavirus_G_chicken_03V0567_DEU_2003__994995

Identity

63.0 mean pLDDT

Orthornavirae› Duplornaviricota› Resentoviricetes› Reovirales› Sedoreoviridae› Rotavirus› Rotavirus_G_chicken/03V0567/DEU/2003

TaxID: 994995

View cluster (4 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 167-294

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2r7cA02	3.30.428.20	Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain	0.75	69.0	6.41e-01	99.2%	86.6%
2gu0A02	3.30.428.20	Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain	0.74	68.0	6.34e-01	100.0%	80.5%
1cauA00	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.59	40.0	3.57e-01	100.0%	49.2%
2l9pA00	3.30.530.20	Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain	0.57	32.0	3.00e-01	70.3%	42.7%
6l4cA01	2.60.120.10	Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls	0.56	39.0	3.50e-01	100.0%	50.0%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
161775	312.1.1.3 ↗	a+b three layers › HIT-like › HIT-related › HIT-related › Rota_NS35_C	0.74	68.0	6.31e-01	100.0%	79.5%
3697524	9.2.1.7 ↗	beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › PF30970	0.56	33.0	3.91e-01	100.0%	83.3%
4977467	331.3.1.0 ↗	a+b two layers › TBP-like › Bet v1-like › Bet v1-like	0.52	31.0	3.41e-01	73.4%	71.4%
3265470	206.1.1.0 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase	0.51	40.0	3.15e-01	83.6%	73.5%

D2 medium residues 83-166

PDB