NSP4

Euk-Vir

Turkey_coronavirus

NSP4__YP_001941177__Turkey_coronavirus__11152

Identity

74.9 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Nidovirales› Coronaviridae› Gammacoronavirus› Turkey_coronavirus

TaxID: 11152

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 407-513

PDB

Domain cluster: rep: nsp4_-TM2-__YP_009944272__Human_coronavirus_HKU1__290028__D409-483

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF16348.11 best	CoV_NSP4_C	143.2	5.20e-42	88.8%	97.9%

D2 medium residues 55-135

PDB

Domain cluster: rep: nsp4__YP_009924386__Rousettus_bat_coronavirus_HKU9__694006__D42-118

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19217.6 best	CoV_NSP4_N	73.3	3.70e-20	98.8%	21.6%

D3 medium residues 222-291

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19217.6 best	CoV_NSP4_N	68.7	8.80e-19	100.0%	19.0%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2k6pA00	3.10.290.10	Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain	0.52	32.0	3.03e-01	82.9%	51.2%
5d3xB00	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.51	37.0	3.06e-01	85.7%	40.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4976925	821.1.1.4 ↗	a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF123	0.54	42.0	3.40e-01	90.0%	84.3%

D4 medium residues 323-402

PDB

Domain cluster: rep: nsp4__YP_009755913__Canada_goose_coronavirus__2569586__D312-391

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF19217.6 best	CoV_NSP4_N	32.6	8.70e-08	87.5%	19.0%