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NS_protein
Euk-VirVesicular_stomatitis_Indiana_virus
NS_protein__NP_041713__Vesicular_stomatitis_Indiana_virus__11277
Identity
- Accession:
- NP_041713 ↗
- Protein ID:
- NS_protein
- Kingdom:
- euk
Quality
68.8
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Rhabdoviridae›
Vesiculovirus›
Vesicular_stomatitis_Indiana_virus
TaxID: 11277
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 198-262
Domain cluster:
rep: phosphoprotein__YP_009094122__Sprivirus_esox__219584__D242-304
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00922.23 best | Phosphoprotein | 43.1 | 5.30e-11 | 100.0% | 22.6% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k47A00 | 1.10.8.440 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Vesicular stomatitis virus phosphoprotein C-terminal domain | 0.76 | 66.0 | 6.44e-01 | 100.0% | 90.4% |
| 1vyiA00 | 1.20.120.820 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphoprotein, C-terminal domain | 0.70 | 61.0 | 5.15e-01 | 100.0% | 70.3% |
| 3p1uA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 47.0 | 2.83e-01 | 86.2% | 49.3% |
| 1nt4A02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.55 | 42.0 | 3.33e-01 | 86.2% | 72.1% |
| 2kddA00 | 6.10.140.560 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 30.0 | 3.21e-01 | 93.8% | 57.9% |
| 2byvE05 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.54 | 34.0 | 3.30e-01 | 100.0% | 53.2% |
| 3flkA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.53 | 41.0 | 2.61e-01 | 84.6% | 79.1% |
| 2zjrG00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.53 | 38.0 | 3.12e-01 | 80.0% | 78.9% |
| 3es5A02 | 1.20.272.60 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.52 | 37.0 | 3.07e-01 | 73.8% | 76.2% |
| 1gyoA00 | 3.90.10.10 | Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 | 0.51 | 41.0 | 3.59e-01 | 93.8% | 92.5% |
| 1l1qA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 40.0 | 3.03e-01 | 90.8% | 50.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 184715 | 4069.1.1.1 ↗ | alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein | 0.76 | 66.0 | 6.44e-01 | 100.0% | 90.4% |
| 137455 | 4069.1.1.2 ↗ | alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › PP_M1 | 0.69 | 61.0 | 5.19e-01 | 100.0% | 72.9% |
| 2863102 | 4069.1.1.0 ↗ | alpha arrays › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain › Phosphoprotein C-terminal domain | 0.69 | 60.0 | 5.15e-01 | 100.0% | 72.2% |
| 3213226 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.60 | 36.0 | 3.64e-01 | 93.8% | 58.5% |
| 4028835 | 2490.2.1.1 ↗ | a/b three-layered sandwiches › Ribosomal protein L13/L15p/L18e/L32e › Ribosomal protein L13 and L16-A › Ribosomal protein L13 and L16-A › Ribosomal_L13 | 0.59 | 42.0 | 3.29e-01 | 78.5% | 72.3% |
| 3877843 | 3075.1.1.2 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › UPF0561 | 0.57 | 35.0 | 3.58e-01 | 96.9% | 60.9% |
| 3471756 | 316.1.1.40 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_7 | 0.57 | 49.0 | 3.50e-01 | 100.0% | 59.5% |
| 3232510 | 3075.1.1.1 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › PFU | 0.57 | 37.0 | 3.57e-01 | 92.3% | 57.3% |
| 3218541 | 109.7.1.22 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › RLL | 0.56 | 40.0 | 3.61e-01 | 75.4% | 92.2% |
| 3882098 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.56 | 42.0 | 3.04e-01 | 86.2% | 95.7% |
| 4132106 | 4337.1.1.0 ↗ | a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain | 0.56 | 42.0 | 3.94e-01 | 86.2% | 66.3% |
| 3472467 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.55 | 40.0 | 3.92e-01 | 96.9% | 70.7% |
| 2137384 | 3144.1.1.1 ↗ | alpha arrays › PBS linker domain of phycobilisome linker polypeptide › PBS linker domain of phycobilisome linker polypeptide › PBS linker domain of phycobilisome linker polypeptide › PBS_linker_poly | 0.53 | 41.0 | 3.14e-01 | 87.7% | 61.8% |
| 3667775 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.50 | 32.0 | 2.75e-01 | 80.0% | 35.0% |